Gene : Glyma.04G196900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14939:SF5 - F-BOX ONLY PROTEIN 22 Genomic Order:  1969
Name:  ? Glyma.04G196900 Secondary Identifier:  ? PAC:30491093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G196900 0.5kb upstream 0.5kb upstream 8690 true Chr04: 46866450-46875139 Glycine max
Glyma.04G196900 0.5kb upstream 0.5kb upstream 500 false Chr04: 46874640-46875139 Glycine max
Glyma.04G196900 0.5kb downstream 0.5kb downstream 8690 true Chr04: 46865950-46874639 Glycine max
Glyma.04G196900 0.5kb downstream 0.5kb downstream 500 false Chr04: 46865950-46866449 Glycine max
Glyma.04G196900 1.0kb upstream 1.0kb upstream 9190 true Chr04: 46866450-46875639 Glycine max
Glyma.04G196900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46874640-46875639 Glycine max
Glyma.04G196900 1.0kb downstream 1.0kb downstream 9190 true Chr04: 46865450-46874639 Glycine max
Glyma.04G196900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46865450-46866449 Glycine max
Glyma.04G196900 2.0kb upstream 2.0kb upstream 10190 true Chr04: 46866450-46876639 Glycine max
Glyma.04G196900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46874640-46876639 Glycine max
Glyma.04G196900 2.0kb downstream 2.0kb downstream 10190 true Chr04: 46864450-46874639 Glycine max
Glyma.04G196900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46864450-46866449 Glycine max
Glyma.04G196900 5.0kb upstream 5.0kb upstream 13190 true Chr04: 46866450-46879639 Glycine max
Glyma.04G196900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46874640-46879639 Glycine max
Glyma.04G196900 5.0kb downstream 5.0kb downstream 13190 true Chr04: 46861450-46874639 Glycine max
Glyma.04G196900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46861450-46866449 Glycine max
Glyma.04G196900 10.0kb upstream 10.0kb upstream 18190 true Chr04: 46866450-46884639 Glycine max
Glyma.04G196900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46874640-46884639 Glycine max
Glyma.04G196900 10.0kb downstream 10.0kb downstream 18190 true Chr04: 46856450-46874639 Glycine max
Glyma.04G196900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46856450-46866449 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300867 5265 Fabidae View MSA
124066508 5270 Rosid View MSA
123742039 5271 Pentapetalae View MSA
122794663 5272 Eudicot View MSA
122042644 5273 Angiosperm View MSA
121343954 5274 Embryophyte View MSA
123379948 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2437 0.0 71.1453    
cufflinks 18.971 0.0 74.2976    
cufflinks 15.3206 0.0 59.7153    
cufflinks 28.5477 0.0 115.741 High  
cufflinks 17.0271 0.0 66.7663    
cufflinks 7.99437 0.0 29.9348   Low
cufflinks 49.5926 0.0 225.134 High High
cufflinks 13.3477 0.0 47.5754    
cufflinks 19.8526 0.0 77.8966 High  
cufflinks 0.672       Low
cufflinks 0.855        
cufflinks 1.277        
cufflinks 0.659       Low
cufflinks 0.916        
cufflinks 1.387        
cufflinks 1.396        
cufflinks 0.628       Low
cufflinks 1.425        
cufflinks 1.322        
cufflinks 1.936       High
cufflinks 0.889        
cufflinks 1.729       High
cufflinks 1.025        
cufflinks 0.933        
cufflinks 1.588       High
cufflinks 0.755        

0 Strain