Gene : Glyma.04G138300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF573 - TRANSCRIPTION TERMINATION FACTOR 2 Genomic Order:  1383
Name:  ? Glyma.04G138300 Secondary Identifier:  ? PAC:30488044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G138300 0.5kb upstream 0.5kb upstream 9728 true Chr04: 21410087-21419814 Glycine max
Glyma.04G138300 0.5kb upstream 0.5kb upstream 500 false Chr04: 21419315-21419814 Glycine max
Glyma.04G138300 0.5kb downstream 0.5kb downstream 9728 true Chr04: 21409587-21419314 Glycine max
Glyma.04G138300 0.5kb downstream 0.5kb downstream 500 false Chr04: 21409587-21410086 Glycine max
Glyma.04G138300 1.0kb upstream 1.0kb upstream 10228 true Chr04: 21410087-21420314 Glycine max
Glyma.04G138300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21419315-21420314 Glycine max
Glyma.04G138300 1.0kb downstream 1.0kb downstream 10228 true Chr04: 21409087-21419314 Glycine max
Glyma.04G138300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21409087-21410086 Glycine max
Glyma.04G138300 2.0kb upstream 2.0kb upstream 11228 true Chr04: 21410087-21421314 Glycine max
Glyma.04G138300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21419315-21421314 Glycine max
Glyma.04G138300 2.0kb downstream 2.0kb downstream 11228 true Chr04: 21408087-21419314 Glycine max
Glyma.04G138300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21408087-21410086 Glycine max
Glyma.04G138300 5.0kb upstream 5.0kb upstream 14228 true Chr04: 21410087-21424314 Glycine max
Glyma.04G138300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21419315-21424314 Glycine max
Glyma.04G138300 5.0kb downstream 5.0kb downstream 14228 true Chr04: 21405087-21419314 Glycine max
Glyma.04G138300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21405087-21410086 Glycine max
Glyma.04G138300 10.0kb upstream 10.0kb upstream 19228 true Chr04: 21410087-21429314 Glycine max
Glyma.04G138300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21419315-21429314 Glycine max
Glyma.04G138300 10.0kb downstream 10.0kb downstream 19228 true Chr04: 21400087-21419314 Glycine max
Glyma.04G138300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21400087-21410086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300627 5265 Fabidae View MSA
124067561 5270 Rosid View MSA
123738895 5271 Pentapetalae View MSA
122788096 5272 Eudicot View MSA
122041978 5273 Angiosperm View MSA
121346055 5274 Embryophyte View MSA
123424068 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.77379 0.0 15.4335   High
cufflinks 5.0945 0.0 13.6601    
cufflinks 6.67305 0.0 17.803   High
cufflinks 4.27232 0.0 11.5369    
cufflinks 3.47813 0.0 9.51676    
cufflinks 3.33381 0.0 9.13738   Low
cufflinks 3.65324 0.0 9.96908    
cufflinks 3.55335 0.0 9.70126    
cufflinks 4.18182 0.0 11.3055    
cufflinks 2.105       Low
cufflinks 2.441        
cufflinks 3.153        
cufflinks 2.575        
cufflinks 2.65        
cufflinks 2.332        
cufflinks 5.614       High
cufflinks 1.516       Low
cufflinks 3.429        
cufflinks 3.939        
cufflinks 5.108       High
cufflinks 2.525        
cufflinks 5.791       High
cufflinks 5.167       High
cufflinks 2.595        
cufflinks 5.196       High
cufflinks 2.363        

0 Strain