Gene : Glyma.19G166400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33447:SF2 - PROTEIN PCS-1, ISOFORM A Genomic Order:  1664
Name:  ? Glyma.19G166400 Secondary Identifier:  ? PAC:30512484
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6745 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G166400 0.5kb upstream 0.5kb upstream 4060 true Chr19: 42742773-42746832 Glycine max
Glyma.19G166400 0.5kb upstream 0.5kb upstream 500 false Chr19: 42742773-42743272 Glycine max
Glyma.19G166400 0.5kb downstream 0.5kb downstream 4060 true Chr19: 42743273-42747332 Glycine max
Glyma.19G166400 0.5kb downstream 0.5kb downstream 500 false Chr19: 42746833-42747332 Glycine max
Glyma.19G166400 1.0kb upstream 1.0kb upstream 4560 true Chr19: 42742273-42746832 Glycine max
Glyma.19G166400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42742273-42743272 Glycine max
Glyma.19G166400 1.0kb downstream 1.0kb downstream 4560 true Chr19: 42743273-42747832 Glycine max
Glyma.19G166400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42746833-42747832 Glycine max
Glyma.19G166400 2.0kb upstream 2.0kb upstream 5560 true Chr19: 42741273-42746832 Glycine max
Glyma.19G166400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42741273-42743272 Glycine max
Glyma.19G166400 2.0kb downstream 2.0kb downstream 5560 true Chr19: 42743273-42748832 Glycine max
Glyma.19G166400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42746833-42748832 Glycine max
Glyma.19G166400 5.0kb upstream 5.0kb upstream 8560 true Chr19: 42738273-42746832 Glycine max
Glyma.19G166400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42738273-42743272 Glycine max
Glyma.19G166400 5.0kb downstream 5.0kb downstream 8560 true Chr19: 42743273-42751832 Glycine max
Glyma.19G166400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42746833-42751832 Glycine max
Glyma.19G166400 10.0kb upstream 10.0kb upstream 13560 true Chr19: 42733273-42746832 Glycine max
Glyma.19G166400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42733273-42743272 Glycine max
Glyma.19G166400 10.0kb downstream 10.0kb downstream 13560 true Chr19: 42743273-42756832 Glycine max
Glyma.19G166400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42746833-42756832 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312285 5265 Fabidae View MSA
124068686 5270 Rosid View MSA
123741810 5271 Pentapetalae View MSA
122787952 5272 Eudicot View MSA
122042106 5273 Angiosperm View MSA
123429015 5275 Viridiplantae View MSA
121309923 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.84189 0.0 8.74927    
cufflinks 2.68796 0.0 8.34681    
cufflinks 1.40535 0.0 4.74941   Low
cufflinks 2.77825 0.0 8.57909    
cufflinks 2.00328 0.0 6.48501    
cufflinks 1.73161 0.0 5.71294    
cufflinks 3.32165 0.0 10.0192   High
cufflinks 2.04372 0.0 6.58984    
cufflinks 1.82465 0.0 5.97705    
cufflinks 1.292        
cufflinks 0.938       Low
cufflinks 1.81        
cufflinks 1.826        
cufflinks 1.587        
cufflinks 0.441       Low
cufflinks 1.619        
cufflinks 1.348        
cufflinks 1.947        
cufflinks 2.342       High
cufflinks 1.433        
cufflinks 1.087        
cufflinks 1.757        
cufflinks 1.63        
cufflinks 1.212        
cufflinks 1.298        
cufflinks 1.369        

0 Strain