Gene : Glyma.04G143200 G. max Wm82.a2.v1
Defline:  (1 of 15) PTHR31375:SF37 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1432
Name:  ? Glyma.04G143200 Secondary Identifier:  ? PAC:30489819
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G143200 0.5kb upstream 0.5kb upstream 2262 true Chr04: 25761808-25764069 Glycine max
Glyma.04G143200 0.5kb upstream 0.5kb upstream 500 false Chr04: 25761808-25762307 Glycine max
Glyma.04G143200 0.5kb downstream 0.5kb downstream 2262 true Chr04: 25762308-25764569 Glycine max
Glyma.04G143200 0.5kb downstream 0.5kb downstream 500 false Chr04: 25764070-25764569 Glycine max
Glyma.04G143200 1.0kb upstream 1.0kb upstream 2762 true Chr04: 25761308-25764069 Glycine max
Glyma.04G143200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 25761308-25762307 Glycine max
Glyma.04G143200 1.0kb downstream 1.0kb downstream 2762 true Chr04: 25762308-25765069 Glycine max
Glyma.04G143200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 25764070-25765069 Glycine max
Glyma.04G143200 2.0kb upstream 2.0kb upstream 3762 true Chr04: 25760308-25764069 Glycine max
Glyma.04G143200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 25760308-25762307 Glycine max
Glyma.04G143200 2.0kb downstream 2.0kb downstream 3762 true Chr04: 25762308-25766069 Glycine max
Glyma.04G143200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 25764070-25766069 Glycine max
Glyma.04G143200 5.0kb upstream 5.0kb upstream 6762 true Chr04: 25757308-25764069 Glycine max
Glyma.04G143200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 25757308-25762307 Glycine max
Glyma.04G143200 5.0kb downstream 5.0kb downstream 6762 true Chr04: 25762308-25769069 Glycine max
Glyma.04G143200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 25764070-25769069 Glycine max
Glyma.04G143200 10.0kb upstream 10.0kb upstream 11762 true Chr04: 25752308-25764069 Glycine max
Glyma.04G143200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 25752308-25762307 Glycine max
Glyma.04G143200 10.0kb downstream 10.0kb downstream 11762 true Chr04: 25762308-25774069 Glycine max
Glyma.04G143200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 25764070-25774069 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309528 5265 Fabidae View MSA
124074380 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 108.372 0.0 331.706 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.16922 0.0 0.662479 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.796     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 45.318     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain