Gene : Glyma.04G154000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10938:SF0 - TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIAL Genomic Order:  1540
Name:  ? Glyma.04G154000 Secondary Identifier:  ? PAC:30487512
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G154000 0.5kb upstream 0.5kb upstream 10883 true Chr04: 35243942-35254824 Glycine max
Glyma.04G154000 0.5kb upstream 0.5kb upstream 500 false Chr04: 35254325-35254824 Glycine max
Glyma.04G154000 0.5kb downstream 0.5kb downstream 10883 true Chr04: 35243442-35254324 Glycine max
Glyma.04G154000 0.5kb downstream 0.5kb downstream 500 false Chr04: 35243442-35243941 Glycine max
Glyma.04G154000 1.0kb upstream 1.0kb upstream 11383 true Chr04: 35243942-35255324 Glycine max
Glyma.04G154000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 35254325-35255324 Glycine max
Glyma.04G154000 1.0kb downstream 1.0kb downstream 11383 true Chr04: 35242942-35254324 Glycine max
Glyma.04G154000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 35242942-35243941 Glycine max
Glyma.04G154000 2.0kb upstream 2.0kb upstream 12383 true Chr04: 35243942-35256324 Glycine max
Glyma.04G154000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 35254325-35256324 Glycine max
Glyma.04G154000 2.0kb downstream 2.0kb downstream 12383 true Chr04: 35241942-35254324 Glycine max
Glyma.04G154000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 35241942-35243941 Glycine max
Glyma.04G154000 5.0kb upstream 5.0kb upstream 15383 true Chr04: 35243942-35259324 Glycine max
Glyma.04G154000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 35254325-35259324 Glycine max
Glyma.04G154000 5.0kb downstream 5.0kb downstream 15383 true Chr04: 35238942-35254324 Glycine max
Glyma.04G154000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 35238942-35243941 Glycine max
Glyma.04G154000 10.0kb upstream 10.0kb upstream 20383 true Chr04: 35243942-35264324 Glycine max
Glyma.04G154000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 35254325-35264324 Glycine max
Glyma.04G154000 10.0kb downstream 10.0kb downstream 20383 true Chr04: 35233942-35254324 Glycine max
Glyma.04G154000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 35233942-35243941 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302671 5265 Fabidae View MSA
124068567 5270 Rosid View MSA
123738585 5271 Pentapetalae View MSA
122786814 5272 Eudicot View MSA
122047018 5273 Angiosperm View MSA
121346506 5274 Embryophyte View MSA
123426932 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1273 0.0 27.8459   High
cufflinks 9.39592 0.0 25.9781   High
cufflinks 5.24947 0.0 15.4618   Low
cufflinks 5.85679 0.0 17.033   Low
cufflinks 9.15669 0.0 25.3976    
cufflinks 7.1465 0.0 20.3127    
cufflinks 7.58589 0.0 21.4911    
cufflinks 8.11708 0.0 22.7264    
cufflinks 6.25134 0.0 18.0381    
cufflinks 0.977        
cufflinks 0.147       Low
cufflinks 0.695        
cufflinks 1.157        
cufflinks 1.556       High
cufflinks 0.195       Low
cufflinks 0.928        
cufflinks 0.367        
cufflinks 1.051        
cufflinks 1.183        
cufflinks 1.026        
cufflinks 0.205       Low
cufflinks 1.078        
cufflinks 1.245        
cufflinks 0.173       Low
cufflinks 1.037        
cufflinks 0.375        

0 Strain