Gene : Glyma.19G169000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24223:SF189 - ABC TRANSPORTER C FAMILY MEMBER 5 Genomic Order:  1690
Name:  ? Glyma.19G169000 Secondary Identifier:  ? PAC:30515273
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G169000 0.5kb upstream 0.5kb upstream 9312 true Chr19: 42961519-42970830 Glycine max
Glyma.19G169000 0.5kb upstream 0.5kb upstream 500 false Chr19: 42970331-42970830 Glycine max
Glyma.19G169000 0.5kb downstream 0.5kb downstream 9312 true Chr19: 42961019-42970330 Glycine max
Glyma.19G169000 0.5kb downstream 0.5kb downstream 500 false Chr19: 42961019-42961518 Glycine max
Glyma.19G169000 1.0kb upstream 1.0kb upstream 9812 true Chr19: 42961519-42971330 Glycine max
Glyma.19G169000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42970331-42971330 Glycine max
Glyma.19G169000 1.0kb downstream 1.0kb downstream 9812 true Chr19: 42960519-42970330 Glycine max
Glyma.19G169000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42960519-42961518 Glycine max
Glyma.19G169000 2.0kb upstream 2.0kb upstream 10812 true Chr19: 42961519-42972330 Glycine max
Glyma.19G169000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42970331-42972330 Glycine max
Glyma.19G169000 2.0kb downstream 2.0kb downstream 10812 true Chr19: 42959519-42970330 Glycine max
Glyma.19G169000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42959519-42961518 Glycine max
Glyma.19G169000 5.0kb upstream 5.0kb upstream 13812 true Chr19: 42961519-42975330 Glycine max
Glyma.19G169000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42970331-42975330 Glycine max
Glyma.19G169000 5.0kb downstream 5.0kb downstream 13812 true Chr19: 42956519-42970330 Glycine max
Glyma.19G169000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42956519-42961518 Glycine max
Glyma.19G169000 10.0kb upstream 10.0kb upstream 18812 true Chr19: 42961519-42980330 Glycine max
Glyma.19G169000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42970331-42980330 Glycine max
Glyma.19G169000 10.0kb downstream 10.0kb downstream 18812 true Chr19: 42951519-42970330 Glycine max
Glyma.19G169000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42951519-42961518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310554 5265 Fabidae View MSA
124062318 5270 Rosid View MSA
123738711 5271 Pentapetalae View MSA
122797524 5272 Eudicot View MSA
122042254 5273 Angiosperm View MSA
121346064 5274 Embryophyte View MSA
123380316 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.37334 0.0 17.0244    
cufflinks 3.51982 0.0 9.47969   Low
cufflinks 10.5071 0.0 28.7621    
cufflinks 13.7594 0.0 38.4951   High
cufflinks 6.87148 0.0 18.3804    
cufflinks 4.93051 0.0 13.1594    
cufflinks 16.4115 0.0 46.7458   High
cufflinks 5.41439 0.0 14.4449    
cufflinks 5.92207 0.0 15.8064    
cufflinks 10.878     High High
cufflinks 1.922       Low
cufflinks 8.142     High  
cufflinks 6.961        
cufflinks 9.122     High High
cufflinks 4.608        
cufflinks 3.253        
cufflinks 8.982     High High
cufflinks 7.111        
cufflinks 5.114        
cufflinks 2.408       Low
cufflinks 3.733        
cufflinks 3.253        
cufflinks 5.202        
cufflinks 2.619       Low
cufflinks 2.373       Low
cufflinks 6.721     High  

0 Strain