Gene : Glyma.19G160100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23050//PTHR23050:SF211 - CALCIUM BINDING PROTEIN Genomic Order:  1601
Name:  ? Glyma.19G160100 Secondary Identifier:  ? PAC:30513152
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G160100 0.5kb upstream 0.5kb upstream 1603 true Chr19: 42103251-42104853 Glycine max
Glyma.19G160100 0.5kb upstream 0.5kb upstream 500 false Chr19: 42104354-42104853 Glycine max
Glyma.19G160100 0.5kb downstream 0.5kb downstream 1603 true Chr19: 42102751-42104353 Glycine max
Glyma.19G160100 0.5kb downstream 0.5kb downstream 500 false Chr19: 42102751-42103250 Glycine max
Glyma.19G160100 1.0kb upstream 1.0kb upstream 2103 true Chr19: 42103251-42105353 Glycine max
Glyma.19G160100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42104354-42105353 Glycine max
Glyma.19G160100 1.0kb downstream 1.0kb downstream 2103 true Chr19: 42102251-42104353 Glycine max
Glyma.19G160100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42102251-42103250 Glycine max
Glyma.19G160100 2.0kb upstream 2.0kb upstream 3103 true Chr19: 42103251-42106353 Glycine max
Glyma.19G160100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42104354-42106353 Glycine max
Glyma.19G160100 2.0kb downstream 2.0kb downstream 3103 true Chr19: 42101251-42104353 Glycine max
Glyma.19G160100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42101251-42103250 Glycine max
Glyma.19G160100 5.0kb upstream 5.0kb upstream 6103 true Chr19: 42103251-42109353 Glycine max
Glyma.19G160100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42104354-42109353 Glycine max
Glyma.19G160100 5.0kb downstream 5.0kb downstream 6103 true Chr19: 42098251-42104353 Glycine max
Glyma.19G160100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42098251-42103250 Glycine max
Glyma.19G160100 10.0kb upstream 10.0kb upstream 11103 true Chr19: 42103251-42114353 Glycine max
Glyma.19G160100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42104354-42114353 Glycine max
Glyma.19G160100 10.0kb downstream 10.0kb downstream 11103 true Chr19: 42093251-42104353 Glycine max
Glyma.19G160100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42093251-42103250 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779373 5273 Angiosperm View MSA
122299319 5265 Fabidae View MSA
124070744 5270 Rosid View MSA
123742543 5271 Pentapetalae View MSA
122770310 5272 Eudicot View MSA
121051039 5274 Embryophyte View MSA
123091145 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.39992 0.0 11.8184   High
cufflinks 0.748196 0.0 2.84356    
cufflinks 0.26202 0.0 1.0369    
cufflinks 0.213757 0.0 0.853019    
cufflinks 0.26085 0.0 1.03507    
cufflinks 10.7644 0.0 32.2295   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.466235 0.0 1.80924    
cufflinks 0.236175 0.0 0.940118 Low  
cufflinks 2.227        
cufflinks 5.403       High
cufflinks 0.637       Low
cufflinks 1.714        
cufflinks 0.363       Low
cufflinks 0.564       Low
cufflinks 1.177        
cufflinks 3.639        
cufflinks 0.652       Low
cufflinks 1.634        
cufflinks 1.018        
cufflinks 2.765        
cufflinks 1.349        
cufflinks 2.163        
cufflinks 8.197     High High
cufflinks 0.936        
cufflinks 8.487     High High

0 Strain