Gene : Glyma.04G091600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Genomic Order:  916
Name:  ? Glyma.04G091600 Secondary Identifier:  ? PAC:30490179
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G091600 0.5kb upstream 0.5kb upstream 2751 true Chr04: 8052037-8054787 Glycine max
Glyma.04G091600 0.5kb upstream 0.5kb upstream 500 false Chr04: 8052037-8052536 Glycine max
Glyma.04G091600 0.5kb downstream 0.5kb downstream 2751 true Chr04: 8052537-8055287 Glycine max
Glyma.04G091600 0.5kb downstream 0.5kb downstream 500 false Chr04: 8054788-8055287 Glycine max
Glyma.04G091600 1.0kb upstream 1.0kb upstream 3251 true Chr04: 8051537-8054787 Glycine max
Glyma.04G091600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 8051537-8052536 Glycine max
Glyma.04G091600 1.0kb downstream 1.0kb downstream 3251 true Chr04: 8052537-8055787 Glycine max
Glyma.04G091600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 8054788-8055787 Glycine max
Glyma.04G091600 2.0kb upstream 2.0kb upstream 4251 true Chr04: 8050537-8054787 Glycine max
Glyma.04G091600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 8050537-8052536 Glycine max
Glyma.04G091600 2.0kb downstream 2.0kb downstream 4251 true Chr04: 8052537-8056787 Glycine max
Glyma.04G091600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 8054788-8056787 Glycine max
Glyma.04G091600 5.0kb upstream 5.0kb upstream 7251 true Chr04: 8047537-8054787 Glycine max
Glyma.04G091600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 8047537-8052536 Glycine max
Glyma.04G091600 5.0kb downstream 5.0kb downstream 7251 true Chr04: 8052537-8059787 Glycine max
Glyma.04G091600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 8054788-8059787 Glycine max
Glyma.04G091600 10.0kb upstream 10.0kb upstream 12251 true Chr04: 8042537-8054787 Glycine max
Glyma.04G091600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 8042537-8052536 Glycine max
Glyma.04G091600 10.0kb downstream 10.0kb downstream 12251 true Chr04: 8052537-8064787 Glycine max
Glyma.04G091600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8054788-8064787 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304898 5265 Fabidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.3906 0.0 62.8741 High High
cufflinks 1.75788 0.0 5.81113    
cufflinks 1.36015 0.0 4.65481    
cufflinks 0.951693 0.0 3.35424    
cufflinks 2.50894 0.0 7.81643    
cufflinks 2.16317 0.0 6.89916    
cufflinks 0.525981 0.0 1.92418   Low
cufflinks 2.94527 0.0 9.05252    
cufflinks 1.66911 0.0 5.52932    
cufflinks 0.405       Low
cufflinks 5.952     High High
cufflinks 1.327        
cufflinks 0.571       Low
cufflinks 0.553       Low
cufflinks 4.712        
cufflinks 1.043        
cufflinks 2.149        
cufflinks 0.937        
cufflinks 2.716        
cufflinks 1.089        
cufflinks 11.683     High High
cufflinks 1.165        
cufflinks 0.551       Low
cufflinks 5.048       High
cufflinks 0.69        
cufflinks 8.122     High High

0 Strain