Gene : Glyma.04G103000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31132:SF2 - EXPRESSED PROTEIN Genomic Order:  1030
Name:  ? Glyma.04G103000 Secondary Identifier:  ? PAC:30490584
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G103000 0.5kb upstream 0.5kb upstream 3834 true Chr04: 9530332-9534165 Glycine max
Glyma.04G103000 0.5kb upstream 0.5kb upstream 500 false Chr04: 9533666-9534165 Glycine max
Glyma.04G103000 0.5kb downstream 0.5kb downstream 3834 true Chr04: 9529832-9533665 Glycine max
Glyma.04G103000 0.5kb downstream 0.5kb downstream 500 false Chr04: 9529832-9530331 Glycine max
Glyma.04G103000 1.0kb upstream 1.0kb upstream 4334 true Chr04: 9530332-9534665 Glycine max
Glyma.04G103000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9533666-9534665 Glycine max
Glyma.04G103000 1.0kb downstream 1.0kb downstream 4334 true Chr04: 9529332-9533665 Glycine max
Glyma.04G103000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9529332-9530331 Glycine max
Glyma.04G103000 2.0kb upstream 2.0kb upstream 5334 true Chr04: 9530332-9535665 Glycine max
Glyma.04G103000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9533666-9535665 Glycine max
Glyma.04G103000 2.0kb downstream 2.0kb downstream 5334 true Chr04: 9528332-9533665 Glycine max
Glyma.04G103000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9528332-9530331 Glycine max
Glyma.04G103000 5.0kb upstream 5.0kb upstream 8334 true Chr04: 9530332-9538665 Glycine max
Glyma.04G103000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9533666-9538665 Glycine max
Glyma.04G103000 5.0kb downstream 5.0kb downstream 8334 true Chr04: 9525332-9533665 Glycine max
Glyma.04G103000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9525332-9530331 Glycine max
Glyma.04G103000 10.0kb upstream 10.0kb upstream 13334 true Chr04: 9530332-9543665 Glycine max
Glyma.04G103000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9533666-9543665 Glycine max
Glyma.04G103000 10.0kb downstream 10.0kb downstream 13334 true Chr04: 9520332-9533665 Glycine max
Glyma.04G103000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9520332-9530331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299104 5265 Fabidae View MSA
124064048 5270 Rosid View MSA
123745943 5271 Pentapetalae View MSA
122791019 5272 Eudicot View MSA
122045269 5273 Angiosperm View MSA
121344429 5274 Embryophyte View MSA
123426064 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2756 0.0 61.1623   Low
cufflinks 31.0372 0.0 129.756 High  
cufflinks 13.1564 0.0 58.5987   Low
cufflinks 34.0484 0.0 140.818 High  
cufflinks 31.2045 0.0 141.407 High  
cufflinks 24.1349 0.0 100.784 High  
cufflinks 17.0993 0.0 78.4197    
cufflinks 43.5154 0.0 188.292 High High
cufflinks 28.152 0.0 128.369 High  
cufflinks 2.99       High
cufflinks 0.691       Low
cufflinks 1.274        
cufflinks 2.773        
cufflinks 3.173       High
cufflinks 1.489        
cufflinks 2.127        
cufflinks 1.479        
cufflinks 2.259        
cufflinks 2.583        
cufflinks 2.425        
cufflinks 0.888       Low
cufflinks 2.619        
cufflinks 2.468        
cufflinks 0.54       Low
cufflinks 2.38        
cufflinks 1.143        

0 Strain