Gene : Glyma.04G104100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR17985 - SER/THR-RICH PROTEIN T10 IN DGCR REGION Genomic Order:  1041
Name:  ? Glyma.04G104100 Secondary Identifier:  ? PAC:30491176
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G104100 0.5kb upstream 0.5kb upstream 3447 true Chr04: 9797470-9800916 Glycine max
Glyma.04G104100 0.5kb upstream 0.5kb upstream 500 false Chr04: 9797470-9797969 Glycine max
Glyma.04G104100 0.5kb downstream 0.5kb downstream 3447 true Chr04: 9797970-9801416 Glycine max
Glyma.04G104100 0.5kb downstream 0.5kb downstream 500 false Chr04: 9800917-9801416 Glycine max
Glyma.04G104100 1.0kb upstream 1.0kb upstream 3947 true Chr04: 9796970-9800916 Glycine max
Glyma.04G104100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9796970-9797969 Glycine max
Glyma.04G104100 1.0kb downstream 1.0kb downstream 3947 true Chr04: 9797970-9801916 Glycine max
Glyma.04G104100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9800917-9801916 Glycine max
Glyma.04G104100 2.0kb upstream 2.0kb upstream 4947 true Chr04: 9795970-9800916 Glycine max
Glyma.04G104100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9795970-9797969 Glycine max
Glyma.04G104100 2.0kb downstream 2.0kb downstream 4947 true Chr04: 9797970-9802916 Glycine max
Glyma.04G104100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9800917-9802916 Glycine max
Glyma.04G104100 5.0kb upstream 5.0kb upstream 7947 true Chr04: 9792970-9800916 Glycine max
Glyma.04G104100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9792970-9797969 Glycine max
Glyma.04G104100 5.0kb downstream 5.0kb downstream 7947 true Chr04: 9797970-9805916 Glycine max
Glyma.04G104100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9800917-9805916 Glycine max
Glyma.04G104100 10.0kb upstream 10.0kb upstream 12947 true Chr04: 9787970-9800916 Glycine max
Glyma.04G104100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9787970-9797969 Glycine max
Glyma.04G104100 10.0kb downstream 10.0kb downstream 12947 true Chr04: 9797970-9810916 Glycine max
Glyma.04G104100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9800917-9810916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312617 5265 Fabidae View MSA
124064404 5270 Rosid View MSA
123753497 5271 Pentapetalae View MSA
122790502 5272 Eudicot View MSA
122045802 5273 Angiosperm View MSA
121346368 5274 Embryophyte View MSA
123428335 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 53.8879 0.0 216.351 High High
cufflinks 15.1763 0.0 59.3113    
cufflinks 0.335524 0.0 1.68184    
cufflinks 0.0313546 0.0 0.140989 Low Low
cufflinks 12.6677 0.0 51.3531    
cufflinks 1.6694 0.0 9.4394    
cufflinks 2.1998 0.0 11.2872    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.291        
cufflinks 0.004     Low Low
cufflinks 3.074        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 3.034        
cufflinks 0.002     Low Low
cufflinks 5.282        
cufflinks 7.279       High
cufflinks 0.677        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.529        
cufflinks 1.847        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.683        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain