Gene : Glyma.04G104200 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG0266//KOG4532 - WD40 repeat-containing protein // WD40-like repeat containing protein Genomic Order:  1042
Name:  ? Glyma.04G104200 Secondary Identifier:  ? PAC:30490822
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G104200 0.5kb upstream 0.5kb upstream 5477 true Chr04: 9806374-9811850 Glycine max
Glyma.04G104200 0.5kb upstream 0.5kb upstream 500 false Chr04: 9811351-9811850 Glycine max
Glyma.04G104200 0.5kb downstream 0.5kb downstream 5477 true Chr04: 9805874-9811350 Glycine max
Glyma.04G104200 0.5kb downstream 0.5kb downstream 500 false Chr04: 9805874-9806373 Glycine max
Glyma.04G104200 1.0kb upstream 1.0kb upstream 5977 true Chr04: 9806374-9812350 Glycine max
Glyma.04G104200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9811351-9812350 Glycine max
Glyma.04G104200 1.0kb downstream 1.0kb downstream 5977 true Chr04: 9805374-9811350 Glycine max
Glyma.04G104200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9805374-9806373 Glycine max
Glyma.04G104200 2.0kb upstream 2.0kb upstream 6977 true Chr04: 9806374-9813350 Glycine max
Glyma.04G104200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9811351-9813350 Glycine max
Glyma.04G104200 2.0kb downstream 2.0kb downstream 6977 true Chr04: 9804374-9811350 Glycine max
Glyma.04G104200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9804374-9806373 Glycine max
Glyma.04G104200 5.0kb upstream 5.0kb upstream 9977 true Chr04: 9806374-9816350 Glycine max
Glyma.04G104200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9811351-9816350 Glycine max
Glyma.04G104200 5.0kb downstream 5.0kb downstream 9977 true Chr04: 9801374-9811350 Glycine max
Glyma.04G104200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9801374-9806373 Glycine max
Glyma.04G104200 10.0kb upstream 10.0kb upstream 14977 true Chr04: 9806374-9821350 Glycine max
Glyma.04G104200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9811351-9821350 Glycine max
Glyma.04G104200 10.0kb downstream 10.0kb downstream 14977 true Chr04: 9796374-9811350 Glycine max
Glyma.04G104200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 9796374-9806373 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299422 5265 Fabidae View MSA
124063136 5270 Rosid View MSA
123741665 5271 Pentapetalae View MSA
122789476 5272 Eudicot View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.93039 0.0 27.0297    
cufflinks 4.00316 0.0 12.0105   Low
cufflinks 9.07704 0.0 24.8287    
cufflinks 12.5431 0.0 33.7197   High
cufflinks 7.70507 0.0 21.3571    
cufflinks 16.4699 0.0 43.9687   High
cufflinks 3.83031 0.0 11.5772   Low
cufflinks 5.32975 0.0 15.3713    
cufflinks 7.28241 0.0 20.2933    
cufflinks 8.443     High High
cufflinks 4.338        
cufflinks 5.426        
cufflinks 2.814        
cufflinks 0.689       Low
cufflinks 1.104       Low
cufflinks 2.768        
cufflinks 3.405        
cufflinks 6.039        
cufflinks 2.993        
cufflinks 2.186        
cufflinks 4.858        
cufflinks 3.177        
cufflinks 2.602        
cufflinks 7.406     High High
cufflinks 3.633        
cufflinks 4.568        

0 Strain