Gene : Glyma.19G162900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31529:SF10 - LOB DOMAIN-CONTAINING PROTEIN 16 Genomic Order:  1629
Name:  ? Glyma.19G162900 Secondary Identifier:  ? PAC:30514850
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G162900 0.5kb upstream 0.5kb upstream 2240 true Chr19: 42363030-42365269 Glycine max
Glyma.19G162900 0.5kb upstream 0.5kb upstream 500 false Chr19: 42363030-42363529 Glycine max
Glyma.19G162900 0.5kb downstream 0.5kb downstream 2240 true Chr19: 42363530-42365769 Glycine max
Glyma.19G162900 0.5kb downstream 0.5kb downstream 500 false Chr19: 42365270-42365769 Glycine max
Glyma.19G162900 1.0kb upstream 1.0kb upstream 2740 true Chr19: 42362530-42365269 Glycine max
Glyma.19G162900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42362530-42363529 Glycine max
Glyma.19G162900 1.0kb downstream 1.0kb downstream 2740 true Chr19: 42363530-42366269 Glycine max
Glyma.19G162900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42365270-42366269 Glycine max
Glyma.19G162900 2.0kb upstream 2.0kb upstream 3740 true Chr19: 42361530-42365269 Glycine max
Glyma.19G162900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42361530-42363529 Glycine max
Glyma.19G162900 2.0kb downstream 2.0kb downstream 3740 true Chr19: 42363530-42367269 Glycine max
Glyma.19G162900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42365270-42367269 Glycine max
Glyma.19G162900 5.0kb upstream 5.0kb upstream 6740 true Chr19: 42358530-42365269 Glycine max
Glyma.19G162900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42358530-42363529 Glycine max
Glyma.19G162900 5.0kb downstream 5.0kb downstream 6740 true Chr19: 42363530-42370269 Glycine max
Glyma.19G162900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42365270-42370269 Glycine max
Glyma.19G162900 10.0kb upstream 10.0kb upstream 11740 true Chr19: 42353530-42365269 Glycine max
Glyma.19G162900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42353530-42363529 Glycine max
Glyma.19G162900 10.0kb downstream 10.0kb downstream 11740 true Chr19: 42363530-42375269 Glycine max
Glyma.19G162900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42365270-42375269 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027059 5273 Angiosperm View MSA
122308626 5265 Fabidae View MSA
124064336 5270 Rosid View MSA
123742221 5271 Pentapetalae View MSA
122792455 5272 Eudicot View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.087205 0.0 0.355777 Low  
cufflinks 0.137672 0.0 0.550015 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.19274 0.0 4.34128   High
cufflinks 0.684041 0.0 2.56366    
cufflinks 0.137542 0.0 0.550188 Low  
cufflinks 0.0733042 0.0 0.301303 Low Low
cufflinks 1.24575 0.0 4.51983   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084        
cufflinks 0.289        
cufflinks 0.523        
cufflinks 0.401        
cufflinks 0.179        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.213        
cufflinks 0.007     Low Low
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.693       High
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.987       High

0 Strain