Gene : Glyma.19G163500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13038 - APG9 AUTOPHAGY 9 Genomic Order:  1635
Name:  ? Glyma.19G163500 Secondary Identifier:  ? PAC:30512278
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G163500 0.5kb upstream 0.5kb upstream 8038 true Chr19: 42435311-42443348 Glycine max
Glyma.19G163500 0.5kb upstream 0.5kb upstream 500 false Chr19: 42435311-42435810 Glycine max
Glyma.19G163500 0.5kb downstream 0.5kb downstream 8038 true Chr19: 42435811-42443848 Glycine max
Glyma.19G163500 0.5kb downstream 0.5kb downstream 500 false Chr19: 42443349-42443848 Glycine max
Glyma.19G163500 1.0kb upstream 1.0kb upstream 8538 true Chr19: 42434811-42443348 Glycine max
Glyma.19G163500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 42434811-42435810 Glycine max
Glyma.19G163500 1.0kb downstream 1.0kb downstream 8538 true Chr19: 42435811-42444348 Glycine max
Glyma.19G163500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 42443349-42444348 Glycine max
Glyma.19G163500 2.0kb upstream 2.0kb upstream 9538 true Chr19: 42433811-42443348 Glycine max
Glyma.19G163500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 42433811-42435810 Glycine max
Glyma.19G163500 2.0kb downstream 2.0kb downstream 9538 true Chr19: 42435811-42445348 Glycine max
Glyma.19G163500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 42443349-42445348 Glycine max
Glyma.19G163500 5.0kb upstream 5.0kb upstream 12538 true Chr19: 42430811-42443348 Glycine max
Glyma.19G163500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 42430811-42435810 Glycine max
Glyma.19G163500 5.0kb downstream 5.0kb downstream 12538 true Chr19: 42435811-42448348 Glycine max
Glyma.19G163500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 42443349-42448348 Glycine max
Glyma.19G163500 10.0kb upstream 10.0kb upstream 17538 true Chr19: 42425811-42443348 Glycine max
Glyma.19G163500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 42425811-42435810 Glycine max
Glyma.19G163500 10.0kb downstream 10.0kb downstream 17538 true Chr19: 42435811-42453348 Glycine max
Glyma.19G163500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 42443349-42453348 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309851 5265 Fabidae View MSA
124064260 5270 Rosid View MSA
123743706 5271 Pentapetalae View MSA
122786972 5272 Eudicot View MSA
122044754 5273 Angiosperm View MSA
121345191 5274 Embryophyte View MSA
123424941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.9998 0.0 15.5361    
cufflinks 3.19288 0.0 10.8445    
cufflinks 18.2613 0.0 57.7551   High
cufflinks 2.34596 0.0 8.57252    
cufflinks 1.99898 0.0 6.02096    
cufflinks 4.0855 0.0 13.1656    
cufflinks 2.55952 0.0 9.26521    
cufflinks 2.88132 0.0 11.8293    
cufflinks 2.79557 0.0 9.79144    
cufflinks 0.632       Low
cufflinks 1.472        
cufflinks 2.631       High
cufflinks 0.671        
cufflinks 0.604       Low
cufflinks 0.655        
cufflinks 1.129        
cufflinks 0.53       Low
cufflinks 1.077        
cufflinks 0.903        
cufflinks 1.284        
cufflinks 0.837        
cufflinks 1.246        
cufflinks 0.888        
cufflinks 2.312       High
cufflinks 1.246        
cufflinks 0.788        

0 Strain