Gene : Glyma.19G196800 G. max Wm82.a2.v1
Genomic Order:  1968 Name:  ? Glyma.19G196800
Secondary Identifier:  ? PAC:30512323
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G196800 0.5kb upstream 0.5kb upstream 4227 true Chr19: 45400481-45404707 Glycine max
Glyma.19G196800 0.5kb upstream 0.5kb upstream 500 false Chr19: 45400481-45400980 Glycine max
Glyma.19G196800 0.5kb downstream 0.5kb downstream 4227 true Chr19: 45400981-45405207 Glycine max
Glyma.19G196800 0.5kb downstream 0.5kb downstream 500 false Chr19: 45404708-45405207 Glycine max
Glyma.19G196800 1.0kb upstream 1.0kb upstream 4727 true Chr19: 45399981-45404707 Glycine max
Glyma.19G196800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45399981-45400980 Glycine max
Glyma.19G196800 1.0kb downstream 1.0kb downstream 4727 true Chr19: 45400981-45405707 Glycine max
Glyma.19G196800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45404708-45405707 Glycine max
Glyma.19G196800 2.0kb upstream 2.0kb upstream 5727 true Chr19: 45398981-45404707 Glycine max
Glyma.19G196800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45398981-45400980 Glycine max
Glyma.19G196800 2.0kb downstream 2.0kb downstream 5727 true Chr19: 45400981-45406707 Glycine max
Glyma.19G196800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45404708-45406707 Glycine max
Glyma.19G196800 5.0kb upstream 5.0kb upstream 8727 true Chr19: 45395981-45404707 Glycine max
Glyma.19G196800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45395981-45400980 Glycine max
Glyma.19G196800 5.0kb downstream 5.0kb downstream 8727 true Chr19: 45400981-45409707 Glycine max
Glyma.19G196800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45404708-45409707 Glycine max
Glyma.19G196800 10.0kb upstream 10.0kb upstream 13727 true Chr19: 45390981-45404707 Glycine max
Glyma.19G196800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45390981-45400980 Glycine max
Glyma.19G196800 10.0kb downstream 10.0kb downstream 13727 true Chr19: 45400981-45414707 Glycine max
Glyma.19G196800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45404708-45414707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300052 5265 Fabidae View MSA
124062346 5270 Rosid View MSA
123742419 5271 Pentapetalae View MSA
122786965 5272 Eudicot View MSA
122050340 5273 Angiosperm View MSA
121351123 5274 Embryophyte View MSA
123382016 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.77173 0.0 5.45621   Low
cufflinks 8.50287 0.0 22.7153    
cufflinks 6.16652 0.0 16.6275    
cufflinks 9.89703 0.0 26.4041    
cufflinks 7.54249 0.0 20.2015    
cufflinks 6.39029 0.0 17.2277    
cufflinks 7.11081 0.0 19.091    
cufflinks 8.07545 0.0 21.5855    
cufflinks 4.12463 0.0 11.4379    
cufflinks 4.764        
cufflinks 3.358        
cufflinks 7.197        
cufflinks 7.764     High  
cufflinks 8.707     High High
cufflinks 0.645       Low
cufflinks 4.789        
cufflinks 2.747        
cufflinks 8.319     High  
cufflinks 9.67     High High
cufflinks 5.576        
cufflinks 4.514        
cufflinks 5.154        
cufflinks 4.754        
cufflinks 3.181        
cufflinks 4.935        
cufflinks 3.779        

0 Strain