Gene : Glyma.19G197400 G. max Wm82.a2.v1
Genomic Order:  1974 Name:  ? Glyma.19G197400
Secondary Identifier:  ? PAC:30513587
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G197400 0.5kb upstream 0.5kb upstream 2668 true Chr19: 45463920-45466587 Glycine max
Glyma.19G197400 0.5kb upstream 0.5kb upstream 500 false Chr19: 45463920-45464419 Glycine max
Glyma.19G197400 0.5kb downstream 0.5kb downstream 2668 true Chr19: 45464420-45467087 Glycine max
Glyma.19G197400 0.5kb downstream 0.5kb downstream 500 false Chr19: 45466588-45467087 Glycine max
Glyma.19G197400 1.0kb upstream 1.0kb upstream 3168 true Chr19: 45463420-45466587 Glycine max
Glyma.19G197400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45463420-45464419 Glycine max
Glyma.19G197400 1.0kb downstream 1.0kb downstream 3168 true Chr19: 45464420-45467587 Glycine max
Glyma.19G197400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45466588-45467587 Glycine max
Glyma.19G197400 2.0kb upstream 2.0kb upstream 4168 true Chr19: 45462420-45466587 Glycine max
Glyma.19G197400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45462420-45464419 Glycine max
Glyma.19G197400 2.0kb downstream 2.0kb downstream 4168 true Chr19: 45464420-45468587 Glycine max
Glyma.19G197400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45466588-45468587 Glycine max
Glyma.19G197400 5.0kb upstream 5.0kb upstream 7168 true Chr19: 45459420-45466587 Glycine max
Glyma.19G197400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45459420-45464419 Glycine max
Glyma.19G197400 5.0kb downstream 5.0kb downstream 7168 true Chr19: 45464420-45471587 Glycine max
Glyma.19G197400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45466588-45471587 Glycine max
Glyma.19G197400 10.0kb upstream 10.0kb upstream 12168 true Chr19: 45454420-45466587 Glycine max
Glyma.19G197400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45454420-45464419 Glycine max
Glyma.19G197400 10.0kb downstream 10.0kb downstream 12168 true Chr19: 45464420-45476587 Glycine max
Glyma.19G197400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45466588-45476587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310353 5265 Fabidae View MSA
124061251 5270 Rosid View MSA
123750424 5271 Pentapetalae View MSA
122773647 5272 Eudicot View MSA
122050740 5273 Angiosperm View MSA
121350407 5274 Embryophyte View MSA
123381715 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.15987 0.0 4.08221   Low
cufflinks 15.973 0.0 42.6934   High
cufflinks 21.21 0.0 56.6166 High High
cufflinks 7.45906 0.0 20.7929    
cufflinks 1.91931 0.0 6.40157    
cufflinks 4.92883 0.0 14.4146    
cufflinks 16.6691 0.0 44.5177   High
cufflinks 1.72586 0.0 5.82781    
cufflinks 0.968931 0.0 3.44939   Low
cufflinks 0.936        
cufflinks 0.241        
cufflinks 11.336     High High
cufflinks 0.429        
cufflinks 1.179        
cufflinks 0.069       Low
cufflinks 1.551        
cufflinks 0.711        
cufflinks 8.546     High High
cufflinks 16.464     High High
cufflinks 1.841        
cufflinks 0.073       Low
cufflinks 1.698        
cufflinks 2.06        
cufflinks 0.49        
cufflinks 1.43        
cufflinks 0.058     Low Low

0 Strain