Gene : Glyma.19G199300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22849:SF38 - E3 UBIQUITIN-PROTEIN LIGASE PUB22-RELATED Genomic Order:  1993
Name:  ? Glyma.19G199300 Secondary Identifier:  ? PAC:30515094
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G199300 0.5kb upstream 0.5kb upstream 2380 true Chr19: 45635420-45637799 Glycine max
Glyma.19G199300 0.5kb upstream 0.5kb upstream 500 false Chr19: 45637300-45637799 Glycine max
Glyma.19G199300 0.5kb downstream 0.5kb downstream 2380 true Chr19: 45634920-45637299 Glycine max
Glyma.19G199300 0.5kb downstream 0.5kb downstream 500 false Chr19: 45634920-45635419 Glycine max
Glyma.19G199300 1.0kb upstream 1.0kb upstream 2880 true Chr19: 45635420-45638299 Glycine max
Glyma.19G199300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 45637300-45638299 Glycine max
Glyma.19G199300 1.0kb downstream 1.0kb downstream 2880 true Chr19: 45634420-45637299 Glycine max
Glyma.19G199300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 45634420-45635419 Glycine max
Glyma.19G199300 2.0kb upstream 2.0kb upstream 3880 true Chr19: 45635420-45639299 Glycine max
Glyma.19G199300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 45637300-45639299 Glycine max
Glyma.19G199300 2.0kb downstream 2.0kb downstream 3880 true Chr19: 45633420-45637299 Glycine max
Glyma.19G199300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 45633420-45635419 Glycine max
Glyma.19G199300 5.0kb upstream 5.0kb upstream 6880 true Chr19: 45635420-45642299 Glycine max
Glyma.19G199300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 45637300-45642299 Glycine max
Glyma.19G199300 5.0kb downstream 5.0kb downstream 6880 true Chr19: 45630420-45637299 Glycine max
Glyma.19G199300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 45630420-45635419 Glycine max
Glyma.19G199300 10.0kb upstream 10.0kb upstream 11880 true Chr19: 45635420-45647299 Glycine max
Glyma.19G199300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 45637300-45647299 Glycine max
Glyma.19G199300 10.0kb downstream 10.0kb downstream 11880 true Chr19: 45625420-45637299 Glycine max
Glyma.19G199300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 45625420-45635419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314147 5265 Fabidae View MSA
124068371 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.23338 0.0 22.6111   High
cufflinks 0.037075 0.0 0.153129 Low  
cufflinks 0.321747 0.0 1.21324    
cufflinks 0.0419661 0.0 0.172052 Low  
cufflinks 0.396808 0.0 1.4816    
cufflinks 14.9928 0.0 40.0508   High
cufflinks 0.0412469 0.0 0.169495 Low  
cufflinks 0.0935464 0.0 0.370684 Low  
cufflinks 0.501718 0.0 1.85087    
cufflinks 0.637        
cufflinks 1.709        
cufflinks 0.71        
cufflinks 0.173        
cufflinks 0.006     Low Low
cufflinks 3.434       High
cufflinks 0.501        
cufflinks 17.504     High High
cufflinks 0.37        
cufflinks 0.026     Low Low
cufflinks 0.308        
cufflinks 2.481        
cufflinks 0.352        
cufflinks 0.145        
cufflinks 1.879        
cufflinks 0.082     Low  
cufflinks 2.93        

0 Strain