Gene : Glyma.19G186600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR19853 - WD REPEAT CONTAINING PROTEIN 3 WDR3 Genomic Order:  1866
Name:  ? Glyma.19G186600 Secondary Identifier:  ? PAC:30511250
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G186600 0.5kb upstream 0.5kb upstream 9463 true Chr19: 44502760-44512222 Glycine max
Glyma.19G186600 0.5kb upstream 0.5kb upstream 500 false Chr19: 44502760-44503259 Glycine max
Glyma.19G186600 0.5kb downstream 0.5kb downstream 9463 true Chr19: 44503260-44512722 Glycine max
Glyma.19G186600 0.5kb downstream 0.5kb downstream 500 false Chr19: 44512223-44512722 Glycine max
Glyma.19G186600 1.0kb upstream 1.0kb upstream 9963 true Chr19: 44502260-44512222 Glycine max
Glyma.19G186600 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44502260-44503259 Glycine max
Glyma.19G186600 1.0kb downstream 1.0kb downstream 9963 true Chr19: 44503260-44513222 Glycine max
Glyma.19G186600 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44512223-44513222 Glycine max
Glyma.19G186600 2.0kb upstream 2.0kb upstream 10963 true Chr19: 44501260-44512222 Glycine max
Glyma.19G186600 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44501260-44503259 Glycine max
Glyma.19G186600 2.0kb downstream 2.0kb downstream 10963 true Chr19: 44503260-44514222 Glycine max
Glyma.19G186600 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44512223-44514222 Glycine max
Glyma.19G186600 5.0kb upstream 5.0kb upstream 13963 true Chr19: 44498260-44512222 Glycine max
Glyma.19G186600 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44498260-44503259 Glycine max
Glyma.19G186600 5.0kb downstream 5.0kb downstream 13963 true Chr19: 44503260-44517222 Glycine max
Glyma.19G186600 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44512223-44517222 Glycine max
Glyma.19G186600 10.0kb upstream 10.0kb upstream 18963 true Chr19: 44493260-44512222 Glycine max
Glyma.19G186600 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44493260-44503259 Glycine max
Glyma.19G186600 10.0kb downstream 10.0kb downstream 18963 true Chr19: 44503260-44522222 Glycine max
Glyma.19G186600 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44512223-44522222 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306718 5265 Fabidae View MSA
124061475 5270 Rosid View MSA
123739283 5271 Pentapetalae View MSA
122787451 5272 Eudicot View MSA
122046155 5273 Angiosperm View MSA
121346306 5274 Embryophyte View MSA
123424601 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.38914 0.0 9.48752   High
cufflinks 1.75199 0.0 5.32302    
cufflinks 0.676816 0.0 2.32613   Low
cufflinks 1.51919 0.0 4.70346    
cufflinks 4.1879 0.0 11.5112   High
cufflinks 1.50287 0.0 4.66306    
cufflinks 2.15817 0.0 6.38524    
cufflinks 1.6408 0.0 5.02705    
cufflinks 2.1432 0.0 6.33296    
cufflinks 0.467        
cufflinks 0.144       Low
cufflinks 0.824        
cufflinks 2.715       High
cufflinks 3.549       High
cufflinks 0.158       Low
cufflinks 0.49        
cufflinks 0.272        
cufflinks 0.604        
cufflinks 1.17        
cufflinks 0.219        
cufflinks 0.27        
cufflinks 0.284        
cufflinks 0.564        
cufflinks 0.187       Low
cufflinks 0.437        
cufflinks 0.526        

0 Strain