Gene : Glyma.19G188800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR21737:SF4 - CACTIN Genomic Order:  1888
Name:  ? Glyma.19G188800 Secondary Identifier:  ? PAC:30511448
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G188800 0.5kb upstream 0.5kb upstream 6569 true Chr19: 44683630-44690198 Glycine max
Glyma.19G188800 0.5kb upstream 0.5kb upstream 500 false Chr19: 44683630-44684129 Glycine max
Glyma.19G188800 0.5kb downstream 0.5kb downstream 6569 true Chr19: 44684130-44690698 Glycine max
Glyma.19G188800 0.5kb downstream 0.5kb downstream 500 false Chr19: 44690199-44690698 Glycine max
Glyma.19G188800 1.0kb upstream 1.0kb upstream 7069 true Chr19: 44683130-44690198 Glycine max
Glyma.19G188800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 44683130-44684129 Glycine max
Glyma.19G188800 1.0kb downstream 1.0kb downstream 7069 true Chr19: 44684130-44691198 Glycine max
Glyma.19G188800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 44690199-44691198 Glycine max
Glyma.19G188800 2.0kb upstream 2.0kb upstream 8069 true Chr19: 44682130-44690198 Glycine max
Glyma.19G188800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 44682130-44684129 Glycine max
Glyma.19G188800 2.0kb downstream 2.0kb downstream 8069 true Chr19: 44684130-44692198 Glycine max
Glyma.19G188800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 44690199-44692198 Glycine max
Glyma.19G188800 5.0kb upstream 5.0kb upstream 11069 true Chr19: 44679130-44690198 Glycine max
Glyma.19G188800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 44679130-44684129 Glycine max
Glyma.19G188800 5.0kb downstream 5.0kb downstream 11069 true Chr19: 44684130-44695198 Glycine max
Glyma.19G188800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 44690199-44695198 Glycine max
Glyma.19G188800 10.0kb upstream 10.0kb upstream 16069 true Chr19: 44674130-44690198 Glycine max
Glyma.19G188800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 44674130-44684129 Glycine max
Glyma.19G188800 10.0kb downstream 10.0kb downstream 16069 true Chr19: 44684130-44700198 Glycine max
Glyma.19G188800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 44690199-44700198 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311471 5265 Fabidae View MSA
124062313 5270 Rosid View MSA
123746898 5271 Pentapetalae View MSA
122792655 5272 Eudicot View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.80579 0.0 18.3384   High
cufflinks 6.10427 0.0 16.5503    
cufflinks 5.14611 0.0 14.0834    
cufflinks 4.17571 0.0 11.6241   Low
cufflinks 6.46253 0.0 17.4442    
cufflinks 7.04093 0.0 18.9416   High
cufflinks 4.86882 0.0 13.4038    
cufflinks 4.99343 0.0 13.7083    
cufflinks 6.08815 0.0 16.4985    
cufflinks 3.8        
cufflinks 3.347        
cufflinks 2.875       Low
cufflinks 4.465        
cufflinks 4.722       High
cufflinks 2.446       Low
cufflinks 4.734       High
cufflinks 3.274        
cufflinks 3.035       Low
cufflinks 3.966        
cufflinks 4.233        
cufflinks 3.738        
cufflinks 4.263        
cufflinks 5.045       High
cufflinks 3.623        
cufflinks 4.042        
cufflinks 4.895       High

0 Strain