Gene : Glyma.04G236200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31707:SF8 - PECTINESTERASE/PECTINESTERASE INHIBITOR 34-RELATED Genomic Order:  2362
Name:  ? Glyma.04G236200 Secondary Identifier:  ? PAC:30488826
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G236200 0.5kb upstream 0.5kb upstream 4769 true Chr04: 50431033-50435801 Glycine max
Glyma.04G236200 0.5kb upstream 0.5kb upstream 500 false Chr04: 50435302-50435801 Glycine max
Glyma.04G236200 0.5kb downstream 0.5kb downstream 4769 true Chr04: 50430533-50435301 Glycine max
Glyma.04G236200 0.5kb downstream 0.5kb downstream 500 false Chr04: 50430533-50431032 Glycine max
Glyma.04G236200 1.0kb upstream 1.0kb upstream 5269 true Chr04: 50431033-50436301 Glycine max
Glyma.04G236200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50435302-50436301 Glycine max
Glyma.04G236200 1.0kb downstream 1.0kb downstream 5269 true Chr04: 50430033-50435301 Glycine max
Glyma.04G236200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50430033-50431032 Glycine max
Glyma.04G236200 2.0kb upstream 2.0kb upstream 6269 true Chr04: 50431033-50437301 Glycine max
Glyma.04G236200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50435302-50437301 Glycine max
Glyma.04G236200 2.0kb downstream 2.0kb downstream 6269 true Chr04: 50429033-50435301 Glycine max
Glyma.04G236200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50429033-50431032 Glycine max
Glyma.04G236200 5.0kb upstream 5.0kb upstream 9269 true Chr04: 50431033-50440301 Glycine max
Glyma.04G236200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50435302-50440301 Glycine max
Glyma.04G236200 5.0kb downstream 5.0kb downstream 9269 true Chr04: 50426033-50435301 Glycine max
Glyma.04G236200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50426033-50431032 Glycine max
Glyma.04G236200 10.0kb upstream 10.0kb upstream 14269 true Chr04: 50431033-50445301 Glycine max
Glyma.04G236200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50435302-50445301 Glycine max
Glyma.04G236200 10.0kb downstream 10.0kb downstream 14269 true Chr04: 50421033-50435301 Glycine max
Glyma.04G236200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50421033-50431032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310193 5265 Fabidae View MSA
124065220 5270 Rosid View MSA
123746199 5271 Pentapetalae View MSA
122794152 5272 Eudicot View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.0166 0.0 9.05519   Low
cufflinks 11.0652 0.0 29.6563    
cufflinks 3.10514 0.0 9.39223   Low
cufflinks 25.1638 0.0 68.1493 High High
cufflinks 11.4827 0.0 30.6757    
cufflinks 4.5995 0.0 13.0674    
cufflinks 4.60968 0.0 13.087    
cufflinks 45.3547 0.0 129.655 High High
cufflinks 8.09505 0.0 21.9484    
cufflinks 37.553     High High
cufflinks 4.05        
cufflinks 3.104        
cufflinks 3.327        
cufflinks 3.152        
cufflinks 7.471     High  
cufflinks 4.436        
cufflinks 2.829        
cufflinks 5.627        
cufflinks 7.285        
cufflinks 2.349       Low
cufflinks 12.281     High High
cufflinks 2.578        
cufflinks 5.958        
cufflinks 2.184       Low
cufflinks 3.115        
cufflinks 9.433     High  

0 Strain