Gene : Glyma.04G238700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  2387
Name:  ? Glyma.04G238700 Secondary Identifier:  ? PAC:30489802
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G238700 0.5kb upstream 0.5kb upstream 2223 true Chr04: 50731253-50733475 Glycine max
Glyma.04G238700 0.5kb upstream 0.5kb upstream 500 false Chr04: 50732976-50733475 Glycine max
Glyma.04G238700 0.5kb downstream 0.5kb downstream 2223 true Chr04: 50730753-50732975 Glycine max
Glyma.04G238700 0.5kb downstream 0.5kb downstream 500 false Chr04: 50730753-50731252 Glycine max
Glyma.04G238700 1.0kb upstream 1.0kb upstream 2723 true Chr04: 50731253-50733975 Glycine max
Glyma.04G238700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50732976-50733975 Glycine max
Glyma.04G238700 1.0kb downstream 1.0kb downstream 2723 true Chr04: 50730253-50732975 Glycine max
Glyma.04G238700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50730253-50731252 Glycine max
Glyma.04G238700 2.0kb upstream 2.0kb upstream 3723 true Chr04: 50731253-50734975 Glycine max
Glyma.04G238700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50732976-50734975 Glycine max
Glyma.04G238700 2.0kb downstream 2.0kb downstream 3723 true Chr04: 50729253-50732975 Glycine max
Glyma.04G238700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50729253-50731252 Glycine max
Glyma.04G238700 5.0kb upstream 5.0kb upstream 6723 true Chr04: 50731253-50737975 Glycine max
Glyma.04G238700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50732976-50737975 Glycine max
Glyma.04G238700 5.0kb downstream 5.0kb downstream 6723 true Chr04: 50726253-50732975 Glycine max
Glyma.04G238700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50726253-50731252 Glycine max
Glyma.04G238700 10.0kb upstream 10.0kb upstream 11723 true Chr04: 50731253-50742975 Glycine max
Glyma.04G238700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50732976-50742975 Glycine max
Glyma.04G238700 10.0kb downstream 10.0kb downstream 11723 true Chr04: 50721253-50732975 Glycine max
Glyma.04G238700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50721253-50731252 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300059 5265 Fabidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.340888 0.0 1.28917   Low
cufflinks 4.02871 0.0 12.2147   High
cufflinks 1.08662 0.0 3.86987    
cufflinks 0.748827 0.0 2.72423    
cufflinks 7.06155 0.0 19.7953   High
cufflinks 3.22198 0.0 10.0315    
cufflinks 0.309337 0.0 1.17469   Low
cufflinks 0.718464 0.0 2.6176    
cufflinks 1.76554 0.0 5.96752    
cufflinks 1.441        
cufflinks 1.09        
cufflinks 3.648        
cufflinks 7.945     High High
cufflinks 9.538     High High
cufflinks 0.079       Low
cufflinks 0.309        
cufflinks 26.761     High High
cufflinks 2.945        
cufflinks 3.764        
cufflinks 0.102       Low
cufflinks 1.352        
cufflinks 0.251        
cufflinks 0.312        
cufflinks 0.954        
cufflinks 0.137       Low
cufflinks 4.75        

0 Strain