Gene : Glyma.04G237900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10788//PTHR10788:SF39 - TREHALOSE-6-PHOSPHATE SYNTHASE Genomic Order:  2379
Name:  ? Glyma.04G237900 Secondary Identifier:  ? PAC:30488543
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G237900 0.5kb upstream 0.5kb upstream 4385 true Chr04: 50633240-50637624 Glycine max
Glyma.04G237900 0.5kb upstream 0.5kb upstream 500 false Chr04: 50633240-50633739 Glycine max
Glyma.04G237900 0.5kb downstream 0.5kb downstream 4385 true Chr04: 50633740-50638124 Glycine max
Glyma.04G237900 0.5kb downstream 0.5kb downstream 500 false Chr04: 50637625-50638124 Glycine max
Glyma.04G237900 1.0kb upstream 1.0kb upstream 4885 true Chr04: 50632740-50637624 Glycine max
Glyma.04G237900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50632740-50633739 Glycine max
Glyma.04G237900 1.0kb downstream 1.0kb downstream 4885 true Chr04: 50633740-50638624 Glycine max
Glyma.04G237900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50637625-50638624 Glycine max
Glyma.04G237900 2.0kb upstream 2.0kb upstream 5885 true Chr04: 50631740-50637624 Glycine max
Glyma.04G237900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50631740-50633739 Glycine max
Glyma.04G237900 2.0kb downstream 2.0kb downstream 5885 true Chr04: 50633740-50639624 Glycine max
Glyma.04G237900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50637625-50639624 Glycine max
Glyma.04G237900 5.0kb upstream 5.0kb upstream 8885 true Chr04: 50628740-50637624 Glycine max
Glyma.04G237900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50628740-50633739 Glycine max
Glyma.04G237900 5.0kb downstream 5.0kb downstream 8885 true Chr04: 50633740-50642624 Glycine max
Glyma.04G237900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50637625-50642624 Glycine max
Glyma.04G237900 10.0kb upstream 10.0kb upstream 13885 true Chr04: 50623740-50637624 Glycine max
Glyma.04G237900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50623740-50633739 Glycine max
Glyma.04G237900 10.0kb downstream 10.0kb downstream 13885 true Chr04: 50633740-50647624 Glycine max
Glyma.04G237900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50637625-50647624 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303383 5265 Fabidae View MSA
124071032 5270 Rosid View MSA
123748006 5271 Pentapetalae View MSA
122793919 5272 Eudicot View MSA
122048868 5273 Angiosperm View MSA
121311146 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.625685 0.0 2.32663    
cufflinks 0.969241 0.0 3.51649    
cufflinks 0.292566 0.0 1.12316   Low
cufflinks 3.07831 0.0 9.97201   High
cufflinks 1.15975 0.0 4.16241    
cufflinks 0.288962 0.0 1.11211 Low Low
cufflinks 0.566009 0.0 2.11549    
cufflinks 2.36214 0.0 7.93408   High
cufflinks 0.541204 0.0 2.02546    
cufflinks 0.239        
cufflinks 0.311        
cufflinks 0.229        
cufflinks 0.218       Low
cufflinks 0.439        
cufflinks 0.265        
cufflinks 0.416        
cufflinks 0.121       Low
cufflinks 0.488        
cufflinks 0.245        
cufflinks 0.408        
cufflinks 0.297        
cufflinks 0.535       High
cufflinks 0.438        
cufflinks 0.4        
cufflinks 0.483        
cufflinks 0.483        

0 Strain