Gene : Glyma.04G243000 G. max Wm82.a2.v1
Defline:  (1 of 7) 1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  2430
Name:  ? Glyma.04G243000 Secondary Identifier:  ? PAC:30489303
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5046 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G243000 0.5kb upstream 0.5kb upstream 6468 true Chr04: 51109534-51116001 Glycine max
Glyma.04G243000 0.5kb upstream 0.5kb upstream 500 false Chr04: 51115502-51116001 Glycine max
Glyma.04G243000 0.5kb downstream 0.5kb downstream 6468 true Chr04: 51109034-51115501 Glycine max
Glyma.04G243000 0.5kb downstream 0.5kb downstream 500 false Chr04: 51109034-51109533 Glycine max
Glyma.04G243000 1.0kb upstream 1.0kb upstream 6968 true Chr04: 51109534-51116501 Glycine max
Glyma.04G243000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 51115502-51116501 Glycine max
Glyma.04G243000 1.0kb downstream 1.0kb downstream 6968 true Chr04: 51108534-51115501 Glycine max
Glyma.04G243000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 51108534-51109533 Glycine max
Glyma.04G243000 2.0kb upstream 2.0kb upstream 7968 true Chr04: 51109534-51117501 Glycine max
Glyma.04G243000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 51115502-51117501 Glycine max
Glyma.04G243000 2.0kb downstream 2.0kb downstream 7968 true Chr04: 51107534-51115501 Glycine max
Glyma.04G243000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 51107534-51109533 Glycine max
Glyma.04G243000 5.0kb upstream 5.0kb upstream 10968 true Chr04: 51109534-51120501 Glycine max
Glyma.04G243000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 51115502-51120501 Glycine max
Glyma.04G243000 5.0kb downstream 5.0kb downstream 10968 true Chr04: 51104534-51115501 Glycine max
Glyma.04G243000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 51104534-51109533 Glycine max
Glyma.04G243000 10.0kb upstream 10.0kb upstream 15968 true Chr04: 51109534-51125501 Glycine max
Glyma.04G243000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 51115502-51125501 Glycine max
Glyma.04G243000 10.0kb downstream 10.0kb downstream 15968 true Chr04: 51099534-51115501 Glycine max
Glyma.04G243000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 51099534-51109533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297179 5265 Fabidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.76108 0.0 16.6358    
cufflinks 1.68038 0.0 5.72822   Low
cufflinks 3.43246 0.0 10.5559    
cufflinks 6.19137 0.0 17.6846    
cufflinks 17.6029 0.0 47.0097   High
cufflinks 19.7782 0.0 52.7661   High
cufflinks 8.83333 0.0 24.3883    
cufflinks 2.09879 0.0 6.95324   Low
cufflinks 6.62975 0.0 18.8223    
cufflinks 2.833        
cufflinks 3.869        
cufflinks 1.749        
cufflinks 8.318     High High
cufflinks 12.761     High High
cufflinks 0.518       Low
cufflinks 4.93        
cufflinks 1.02       Low
cufflinks 3.557        
cufflinks 0.769       Low
cufflinks 8.76     High High
cufflinks 2.733        
cufflinks 7.258     High  
cufflinks 3.048        
cufflinks 2.376        
cufflinks 7.701     High  
cufflinks 2.393        

0 Strain