Gene : Glyma.04G240600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11802//PTHR11802:SF20 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  2406
Name:  ? Glyma.04G240600 Secondary Identifier:  ? PAC:30487355
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G240600 0.5kb upstream 0.5kb upstream 4916 true Chr04: 50887992-50892907 Glycine max
Glyma.04G240600 0.5kb upstream 0.5kb upstream 500 false Chr04: 50887992-50888491 Glycine max
Glyma.04G240600 0.5kb downstream 0.5kb downstream 4916 true Chr04: 50888492-50893407 Glycine max
Glyma.04G240600 0.5kb downstream 0.5kb downstream 500 false Chr04: 50892908-50893407 Glycine max
Glyma.04G240600 1.0kb upstream 1.0kb upstream 5416 true Chr04: 50887492-50892907 Glycine max
Glyma.04G240600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50887492-50888491 Glycine max
Glyma.04G240600 1.0kb downstream 1.0kb downstream 5416 true Chr04: 50888492-50893907 Glycine max
Glyma.04G240600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50892908-50893907 Glycine max
Glyma.04G240600 2.0kb upstream 2.0kb upstream 6416 true Chr04: 50886492-50892907 Glycine max
Glyma.04G240600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50886492-50888491 Glycine max
Glyma.04G240600 2.0kb downstream 2.0kb downstream 6416 true Chr04: 50888492-50894907 Glycine max
Glyma.04G240600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50892908-50894907 Glycine max
Glyma.04G240600 5.0kb upstream 5.0kb upstream 9416 true Chr04: 50883492-50892907 Glycine max
Glyma.04G240600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50883492-50888491 Glycine max
Glyma.04G240600 5.0kb downstream 5.0kb downstream 9416 true Chr04: 50888492-50897907 Glycine max
Glyma.04G240600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50892908-50897907 Glycine max
Glyma.04G240600 10.0kb upstream 10.0kb upstream 14416 true Chr04: 50878492-50892907 Glycine max
Glyma.04G240600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50878492-50888491 Glycine max
Glyma.04G240600 10.0kb downstream 10.0kb downstream 14416 true Chr04: 50888492-50902907 Glycine max
Glyma.04G240600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50892908-50902907 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310905 5265 Fabidae View MSA
124061413 5270 Rosid View MSA
123737952 5271 Pentapetalae View MSA
122791491 5272 Eudicot View MSA
122043115 5273 Angiosperm View MSA
121351274 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0366063 0.0 0.153268 Low Low
cufflinks 3.32032 0.0 14.0712    
cufflinks 0.106438 0.0 0.42291 Low Low
cufflinks 2.34052 0.0 11.3761    
cufflinks 1.50171 0.0 9.43647    
cufflinks 1.19629 0.0 4.84358    
cufflinks 7.17914 0.0 28.7658   High
cufflinks 0.389159 0.0 3.28389    
cufflinks 1.97033 0.0 9.90859    
cufflinks 0.048     Low  
cufflinks 0.054        
cufflinks 0.073     Low  
cufflinks 0.394       High
cufflinks 0.517       High
cufflinks 0.021     Low Low
cufflinks 0.235        
cufflinks 0.087        
cufflinks 0.072     Low  
cufflinks 0.433       High
cufflinks 0.126        
cufflinks 0.045     Low  
cufflinks 0.236        
cufflinks 0.356       High
cufflinks 0.039     Low Low
cufflinks 0.172        
cufflinks 0.075        

0 Strain