Gene : Glyma.19G219500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11453:SF44 - BORON TRANSPORTER 1-RELATED Genomic Order:  2195
Name:  ? Glyma.19G219500 Secondary Identifier:  ? PAC:30511866
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G219500 0.5kb upstream 0.5kb upstream 5219 true Chr19: 47176941-47182159 Glycine max
Glyma.19G219500 0.5kb upstream 0.5kb upstream 500 false Chr19: 47176941-47177440 Glycine max
Glyma.19G219500 0.5kb downstream 0.5kb downstream 5219 true Chr19: 47177441-47182659 Glycine max
Glyma.19G219500 0.5kb downstream 0.5kb downstream 500 false Chr19: 47182160-47182659 Glycine max
Glyma.19G219500 1.0kb upstream 1.0kb upstream 5719 true Chr19: 47176441-47182159 Glycine max
Glyma.19G219500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47176441-47177440 Glycine max
Glyma.19G219500 1.0kb downstream 1.0kb downstream 5719 true Chr19: 47177441-47183159 Glycine max
Glyma.19G219500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47182160-47183159 Glycine max
Glyma.19G219500 2.0kb upstream 2.0kb upstream 6719 true Chr19: 47175441-47182159 Glycine max
Glyma.19G219500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47175441-47177440 Glycine max
Glyma.19G219500 2.0kb downstream 2.0kb downstream 6719 true Chr19: 47177441-47184159 Glycine max
Glyma.19G219500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47182160-47184159 Glycine max
Glyma.19G219500 5.0kb upstream 5.0kb upstream 9719 true Chr19: 47172441-47182159 Glycine max
Glyma.19G219500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47172441-47177440 Glycine max
Glyma.19G219500 5.0kb downstream 5.0kb downstream 9719 true Chr19: 47177441-47187159 Glycine max
Glyma.19G219500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47182160-47187159 Glycine max
Glyma.19G219500 10.0kb upstream 10.0kb upstream 14719 true Chr19: 47167441-47182159 Glycine max
Glyma.19G219500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47167441-47177440 Glycine max
Glyma.19G219500 10.0kb downstream 10.0kb downstream 14719 true Chr19: 47177441-47192159 Glycine max
Glyma.19G219500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47182160-47192159 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305404 5265 Fabidae View MSA
124062644 5270 Rosid View MSA
123739713 5271 Pentapetalae View MSA
122788389 5272 Eudicot View MSA
122051524 5273 Angiosperm View MSA
121349388 5274 Embryophyte View MSA
123428770 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.46042 0.0 25.2738    
cufflinks 2.18369 0.0 6.61763   Low
cufflinks 13.4347 0.0 35.9329    
cufflinks 3.71324 0.0 10.5067    
cufflinks 18.0593 0.0 48.7791    
cufflinks 15.1714 0.0 40.6923    
cufflinks 2.05854 0.0 6.30062   Low
cufflinks 21.8954 0.0 59.9722 High  
cufflinks 23.0354 0.0 63.3255 High  
cufflinks 2.482        
cufflinks 2.059        
cufflinks 9.068     High  
cufflinks 28.336     High High
cufflinks 15.522     High High
cufflinks 1.566        
cufflinks 0.901        
cufflinks 8.645     High  
cufflinks 5.798        
cufflinks 1.169        
cufflinks 0.543       Low
cufflinks 5.213        
cufflinks 0.731       Low
cufflinks 0.409       Low
cufflinks 5.926        
cufflinks 0.78        
cufflinks 3.235        

0 Strain