Gene : Glyma.19G219800 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.1.145 - 3-beta-hydroxy-Delta(5)-steroid dehydrogenase / Progesterone reductase Genomic Order:  2198
Name:  ? Glyma.19G219800 Secondary Identifier:  ? PAC:30511270
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G219800 0.5kb upstream 0.5kb upstream 2118 true Chr19: 47208249-47210366 Glycine max
Glyma.19G219800 0.5kb upstream 0.5kb upstream 500 false Chr19: 47208249-47208748 Glycine max
Glyma.19G219800 0.5kb downstream 0.5kb downstream 2118 true Chr19: 47208749-47210866 Glycine max
Glyma.19G219800 0.5kb downstream 0.5kb downstream 500 false Chr19: 47210367-47210866 Glycine max
Glyma.19G219800 1.0kb upstream 1.0kb upstream 2618 true Chr19: 47207749-47210366 Glycine max
Glyma.19G219800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47207749-47208748 Glycine max
Glyma.19G219800 1.0kb downstream 1.0kb downstream 2618 true Chr19: 47208749-47211366 Glycine max
Glyma.19G219800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47210367-47211366 Glycine max
Glyma.19G219800 2.0kb upstream 2.0kb upstream 3618 true Chr19: 47206749-47210366 Glycine max
Glyma.19G219800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47206749-47208748 Glycine max
Glyma.19G219800 2.0kb downstream 2.0kb downstream 3618 true Chr19: 47208749-47212366 Glycine max
Glyma.19G219800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47210367-47212366 Glycine max
Glyma.19G219800 5.0kb upstream 5.0kb upstream 6618 true Chr19: 47203749-47210366 Glycine max
Glyma.19G219800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47203749-47208748 Glycine max
Glyma.19G219800 5.0kb downstream 5.0kb downstream 6618 true Chr19: 47208749-47215366 Glycine max
Glyma.19G219800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47210367-47215366 Glycine max
Glyma.19G219800 10.0kb upstream 10.0kb upstream 11618 true Chr19: 47198749-47210366 Glycine max
Glyma.19G219800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47198749-47208748 Glycine max
Glyma.19G219800 10.0kb downstream 10.0kb downstream 11618 true Chr19: 47208749-47220366 Glycine max
Glyma.19G219800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47210367-47220366 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303462 5265 Fabidae View MSA
124066555 5270 Rosid View MSA
123753766 5271 Pentapetalae View MSA
122796272 5272 Eudicot View MSA
122051522 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.543261 0.0 2.03462    
cufflinks 0.100216 0.0 0.401652 Low Low
cufflinks 0.0524123 0.0 0.216228 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 11.605 0.0 31.9688    
cufflinks 23.7092 0.0 63.2707 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.574044 0.0 2.14138    
cufflinks 9.1835 0.0 25.7746    
cufflinks 0.043     Low  
cufflinks 0.535        
cufflinks 0.036     Low  
cufflinks 33.14     High High
cufflinks 42.877     High High
cufflinks 0.189        
cufflinks 0.012     Low Low
cufflinks 19.783     High High
cufflinks 0.009     Low Low
cufflinks 0.621        
cufflinks 0.045     Low  
cufflinks 1.327        
cufflinks 0.048     Low  
cufflinks 0.161        
cufflinks 0.328        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.812     High High

0 Strain