Gene : Glyma.19G221400 G. max Wm82.a2.v1
Defline:  (1 of 8) 6.1.1.15 - Proline--tRNA ligase / Prolyl-tRNA synthetase Genomic Order:  2214
Name:  ? Glyma.19G221400 Secondary Identifier:  ? PAC:30513828
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5188 Glycine max pathologic  
Gmax PWY-5918 Glycine max pathologic  
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G221400 0.5kb upstream 0.5kb upstream 5531 true Chr19: 47320622-47326152 Glycine max
Glyma.19G221400 0.5kb upstream 0.5kb upstream 500 false Chr19: 47320622-47321121 Glycine max
Glyma.19G221400 0.5kb downstream 0.5kb downstream 5531 true Chr19: 47321122-47326652 Glycine max
Glyma.19G221400 0.5kb downstream 0.5kb downstream 500 false Chr19: 47326153-47326652 Glycine max
Glyma.19G221400 1.0kb upstream 1.0kb upstream 6031 true Chr19: 47320122-47326152 Glycine max
Glyma.19G221400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47320122-47321121 Glycine max
Glyma.19G221400 1.0kb downstream 1.0kb downstream 6031 true Chr19: 47321122-47327152 Glycine max
Glyma.19G221400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47326153-47327152 Glycine max
Glyma.19G221400 2.0kb upstream 2.0kb upstream 7031 true Chr19: 47319122-47326152 Glycine max
Glyma.19G221400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47319122-47321121 Glycine max
Glyma.19G221400 2.0kb downstream 2.0kb downstream 7031 true Chr19: 47321122-47328152 Glycine max
Glyma.19G221400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47326153-47328152 Glycine max
Glyma.19G221400 5.0kb upstream 5.0kb upstream 10031 true Chr19: 47316122-47326152 Glycine max
Glyma.19G221400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47316122-47321121 Glycine max
Glyma.19G221400 5.0kb downstream 5.0kb downstream 10031 true Chr19: 47321122-47331152 Glycine max
Glyma.19G221400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47326153-47331152 Glycine max
Glyma.19G221400 10.0kb upstream 10.0kb upstream 15031 true Chr19: 47311122-47326152 Glycine max
Glyma.19G221400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47311122-47321121 Glycine max
Glyma.19G221400 10.0kb downstream 10.0kb downstream 15031 true Chr19: 47321122-47336152 Glycine max
Glyma.19G221400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47326153-47336152 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308357 5265 Fabidae View MSA
124064223 5270 Rosid View MSA
123739091 5271 Pentapetalae View MSA
122787738 5272 Eudicot View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.1172 0.0 179.732 High  
cufflinks 38.9991 0.0 186.531 High  
cufflinks 21.7733 0.0 94.201 High Low
cufflinks 35.3283 0.0 168.686 High  
cufflinks 57.3613 0.0 281.193 High  
cufflinks 67.5577 0.0 312.964 High High
cufflinks 59.1826 0.0 264.566 High  
cufflinks 34.16 0.0 157.23 High  
cufflinks 49.0278 0.0 229.46 High  
cufflinks 4.112        
cufflinks 2.365       Low
cufflinks 3.593        
cufflinks 10.536     High High
cufflinks 12.738     High High
cufflinks 1.748       Low
cufflinks 5.082        
cufflinks 4.469        
cufflinks 3.83        
cufflinks 5.066        
cufflinks 3.821        
cufflinks 3.888        
cufflinks 4.303        
cufflinks 4.768        
cufflinks 3.614        
cufflinks 4.588        
cufflinks 4.68        

0 Strain