Gene : Glyma.19G215500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30620:SF4 - BETA-D-XYLOSIDASE 2-RELATED Genomic Order:  2155
Name:  ? Glyma.19G215500 Secondary Identifier:  ? PAC:30512459
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G215500 0.5kb upstream 0.5kb upstream 7002 true Chr19: 46855147-46862148 Glycine max
Glyma.19G215500 0.5kb upstream 0.5kb upstream 500 false Chr19: 46861649-46862148 Glycine max
Glyma.19G215500 0.5kb downstream 0.5kb downstream 7002 true Chr19: 46854647-46861648 Glycine max
Glyma.19G215500 0.5kb downstream 0.5kb downstream 500 false Chr19: 46854647-46855146 Glycine max
Glyma.19G215500 1.0kb upstream 1.0kb upstream 7502 true Chr19: 46855147-46862648 Glycine max
Glyma.19G215500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46861649-46862648 Glycine max
Glyma.19G215500 1.0kb downstream 1.0kb downstream 7502 true Chr19: 46854147-46861648 Glycine max
Glyma.19G215500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46854147-46855146 Glycine max
Glyma.19G215500 2.0kb upstream 2.0kb upstream 8502 true Chr19: 46855147-46863648 Glycine max
Glyma.19G215500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46861649-46863648 Glycine max
Glyma.19G215500 2.0kb downstream 2.0kb downstream 8502 true Chr19: 46853147-46861648 Glycine max
Glyma.19G215500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46853147-46855146 Glycine max
Glyma.19G215500 5.0kb upstream 5.0kb upstream 11502 true Chr19: 46855147-46866648 Glycine max
Glyma.19G215500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46861649-46866648 Glycine max
Glyma.19G215500 5.0kb downstream 5.0kb downstream 11502 true Chr19: 46850147-46861648 Glycine max
Glyma.19G215500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46850147-46855146 Glycine max
Glyma.19G215500 10.0kb upstream 10.0kb upstream 16502 true Chr19: 46855147-46871648 Glycine max
Glyma.19G215500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46861649-46871648 Glycine max
Glyma.19G215500 10.0kb downstream 10.0kb downstream 16502 true Chr19: 46845147-46861648 Glycine max
Glyma.19G215500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46845147-46855146 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299683 5265 Fabidae View MSA
124068903 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64756 0.0 7.12214   Low
cufflinks 8.99277 0.0 34.3219    
cufflinks 4.97296 0.0 18.3305    
cufflinks 2.792 0.0 10.439    
cufflinks 3.41279 0.0 15.3344    
cufflinks 1.06518 0.0 6.25236   Low
cufflinks 4.15633 0.0 15.9819    
cufflinks 9.26718 0.0 38.8489   High
cufflinks 11.1336 0.0 45.9823   High
cufflinks 1.504       High
cufflinks 0.599        
cufflinks 0.479        
cufflinks 0.574        
cufflinks 0.586        
cufflinks 0.702        
cufflinks 1.523       High
cufflinks 0.36       Low
cufflinks 0.376       Low
cufflinks 1.153        
cufflinks 1.38       High
cufflinks 0.477        
cufflinks 1.144        
cufflinks 1.433       High
cufflinks 1.022        
cufflinks 1.063        
cufflinks 0.471        

0 Strain