Gene : Glyma.19G207900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32370:SF30 - BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 Genomic Order:  2079
Name:  ? Glyma.19G207900 Secondary Identifier:  ? PAC:30512305
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G207900 0.5kb upstream 0.5kb upstream 5080 true Chr19: 46291023-46296102 Glycine max
Glyma.19G207900 0.5kb upstream 0.5kb upstream 500 false Chr19: 46295603-46296102 Glycine max
Glyma.19G207900 0.5kb downstream 0.5kb downstream 5080 true Chr19: 46290523-46295602 Glycine max
Glyma.19G207900 0.5kb downstream 0.5kb downstream 500 false Chr19: 46290523-46291022 Glycine max
Glyma.19G207900 1.0kb upstream 1.0kb upstream 5580 true Chr19: 46291023-46296602 Glycine max
Glyma.19G207900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 46295603-46296602 Glycine max
Glyma.19G207900 1.0kb downstream 1.0kb downstream 5580 true Chr19: 46290023-46295602 Glycine max
Glyma.19G207900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 46290023-46291022 Glycine max
Glyma.19G207900 2.0kb upstream 2.0kb upstream 6580 true Chr19: 46291023-46297602 Glycine max
Glyma.19G207900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 46295603-46297602 Glycine max
Glyma.19G207900 2.0kb downstream 2.0kb downstream 6580 true Chr19: 46289023-46295602 Glycine max
Glyma.19G207900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 46289023-46291022 Glycine max
Glyma.19G207900 5.0kb upstream 5.0kb upstream 9580 true Chr19: 46291023-46300602 Glycine max
Glyma.19G207900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 46295603-46300602 Glycine max
Glyma.19G207900 5.0kb downstream 5.0kb downstream 9580 true Chr19: 46286023-46295602 Glycine max
Glyma.19G207900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 46286023-46291022 Glycine max
Glyma.19G207900 10.0kb upstream 10.0kb upstream 14580 true Chr19: 46291023-46305602 Glycine max
Glyma.19G207900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 46295603-46305602 Glycine max
Glyma.19G207900 10.0kb downstream 10.0kb downstream 14580 true Chr19: 46281023-46295602 Glycine max
Glyma.19G207900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 46281023-46291022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255148 5265 Fabidae View MSA
124062194 5270 Rosid View MSA
123742261 5271 Pentapetalae View MSA
122789969 5272 Eudicot View MSA
122042362 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.315646 0.0 2.00895    
cufflinks 0.562056 0.0 3.9453    
cufflinks 0.0697107 0.0 0.276729 Low Low
cufflinks 0.275341 0.0 1.36174    
cufflinks 1.75981 0.0 11.6373   High
cufflinks 0.644091 0.0 3.74631    
cufflinks 1.55263 0.0 9.93911   High
cufflinks 1.59853 0.0 7.58813   High
cufflinks 0.369525 0.0 1.76808    
cufflinks 0.024     Low  
cufflinks 0.025     Low  
cufflinks 0.018     Low  
cufflinks 0.056     Low  
cufflinks 0.017     Low  
cufflinks 0.003     Low Low
cufflinks 0.28       High
cufflinks 0.029     Low  
cufflinks 0.037     Low  
cufflinks 0.032     Low  
cufflinks 0.145       High
cufflinks 0.024     Low  
cufflinks 0.176       High
cufflinks 0.082     Low  
cufflinks 0.011     Low Low
cufflinks 0.278       High
cufflinks 0.02     Low  

0 Strain