Gene : Glyma.19G245500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00187//PF00967 - Chitin recognition protein (Chitin_bind_1) // Barwin family (Barwin) Genomic Order:  2455
Name:  ? Glyma.19G245500 Secondary Identifier:  ? PAC:30512836
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G245500 0.5kb upstream 0.5kb upstream 1935 true Chr19: 49240784-49242718 Glycine max
Glyma.19G245500 0.5kb upstream 0.5kb upstream 500 false Chr19: 49240784-49241283 Glycine max
Glyma.19G245500 0.5kb downstream 0.5kb downstream 1935 true Chr19: 49241284-49243218 Glycine max
Glyma.19G245500 0.5kb downstream 0.5kb downstream 500 false Chr19: 49242719-49243218 Glycine max
Glyma.19G245500 1.0kb upstream 1.0kb upstream 2435 true Chr19: 49240284-49242718 Glycine max
Glyma.19G245500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49240284-49241283 Glycine max
Glyma.19G245500 1.0kb downstream 1.0kb downstream 2435 true Chr19: 49241284-49243718 Glycine max
Glyma.19G245500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49242719-49243718 Glycine max
Glyma.19G245500 2.0kb upstream 2.0kb upstream 3435 true Chr19: 49239284-49242718 Glycine max
Glyma.19G245500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49239284-49241283 Glycine max
Glyma.19G245500 2.0kb downstream 2.0kb downstream 3435 true Chr19: 49241284-49244718 Glycine max
Glyma.19G245500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49242719-49244718 Glycine max
Glyma.19G245500 5.0kb upstream 5.0kb upstream 6435 true Chr19: 49236284-49242718 Glycine max
Glyma.19G245500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49236284-49241283 Glycine max
Glyma.19G245500 5.0kb downstream 5.0kb downstream 6435 true Chr19: 49241284-49247718 Glycine max
Glyma.19G245500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49242719-49247718 Glycine max
Glyma.19G245500 10.0kb upstream 10.0kb upstream 11435 true Chr19: 49231284-49242718 Glycine max
Glyma.19G245500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49231284-49241283 Glycine max
Glyma.19G245500 10.0kb downstream 10.0kb downstream 11435 true Chr19: 49241284-49252718 Glycine max
Glyma.19G245500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49242719-49252718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122247788 5265 Fabidae Singleton cluster - no MSA
124067822 5270 Rosid View MSA
123742703 5271 Pentapetalae View MSA
122790413 5272 Eudicot View MSA
122047650 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.53253 0.0 17.0883    
cufflinks 3.125 0.0 10.5054    
cufflinks 19.7603 0.0 53.416   High
cufflinks 4.72549 0.0 14.9765    
cufflinks 2.41653 0.0 8.29685    
cufflinks 25.5486 0.0 68.3278 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.237 0.0 7.78158    
cufflinks 1.92537 0.0 6.77308    
cufflinks 0.677       Low
cufflinks 13.031     High High
cufflinks 14.323     High High
cufflinks 3.18        
cufflinks 6.493        
cufflinks 0.352       Low
cufflinks 4.256        
cufflinks 0.204       Low
cufflinks 2.912        
cufflinks 2.523        
cufflinks 6.688        
cufflinks 3.102        
cufflinks 5.844        
cufflinks 2.376        
cufflinks 10.534     High High
cufflinks 5.268        
cufflinks 1.645        

0 Strain