Gene : Glyma.19G239500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10857:SF26 - PROTEIN BONZAI 3 Genomic Order:  2395
Name:  ? Glyma.19G239500 Secondary Identifier:  ? PAC:30513385
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G239500 0.5kb upstream 0.5kb upstream 11521 true Chr19: 48772248-48783768 Glycine max
Glyma.19G239500 0.5kb upstream 0.5kb upstream 500 false Chr19: 48783269-48783768 Glycine max
Glyma.19G239500 0.5kb downstream 0.5kb downstream 11521 true Chr19: 48771748-48783268 Glycine max
Glyma.19G239500 0.5kb downstream 0.5kb downstream 500 false Chr19: 48771748-48772247 Glycine max
Glyma.19G239500 1.0kb upstream 1.0kb upstream 12021 true Chr19: 48772248-48784268 Glycine max
Glyma.19G239500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48783269-48784268 Glycine max
Glyma.19G239500 1.0kb downstream 1.0kb downstream 12021 true Chr19: 48771248-48783268 Glycine max
Glyma.19G239500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48771248-48772247 Glycine max
Glyma.19G239500 2.0kb upstream 2.0kb upstream 13021 true Chr19: 48772248-48785268 Glycine max
Glyma.19G239500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48783269-48785268 Glycine max
Glyma.19G239500 2.0kb downstream 2.0kb downstream 13021 true Chr19: 48770248-48783268 Glycine max
Glyma.19G239500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48770248-48772247 Glycine max
Glyma.19G239500 5.0kb upstream 5.0kb upstream 16021 true Chr19: 48772248-48788268 Glycine max
Glyma.19G239500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48783269-48788268 Glycine max
Glyma.19G239500 5.0kb downstream 5.0kb downstream 16021 true Chr19: 48767248-48783268 Glycine max
Glyma.19G239500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48767248-48772247 Glycine max
Glyma.19G239500 10.0kb upstream 10.0kb upstream 21021 true Chr19: 48772248-48793268 Glycine max
Glyma.19G239500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48783269-48793268 Glycine max
Glyma.19G239500 10.0kb downstream 10.0kb downstream 21021 true Chr19: 48762248-48783268 Glycine max
Glyma.19G239500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48762248-48772247 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306328 5265 Fabidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.09266 0.0 4.71396    
cufflinks 1.18133 0.0 4.9395    
cufflinks 2.79961 0.0 15.1207   High
cufflinks 2.53685 0.0 13.4545    
cufflinks 1.15019 0.0 4.78843    
cufflinks 4.16949 0.0 13.2671   High
cufflinks 1.24862 0.0 9.33523    
cufflinks 1.44184 0.0 5.9586    
cufflinks 1.38149 0.0 5.47776    
cufflinks 0.005     Low Low
cufflinks 0.777       High
cufflinks 0.101     Low  
cufflinks 0.147        
cufflinks 0.038     Low  
cufflinks 0.125        
cufflinks 0.011     Low  
cufflinks 0.013     Low  
cufflinks 0.2        
cufflinks 0.007     Low  
cufflinks 0.008     Low  
cufflinks 0.13        
cufflinks 0.007     Low  
cufflinks 0.012     Low  
cufflinks 0.476       High
cufflinks 0.003     Low Low
cufflinks 0.459       High

0 Strain