Gene : Glyma.19G240000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12817 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B Genomic Order:  2400
Name:  ? Glyma.19G240000 Secondary Identifier:  ? PAC:30514990
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G240000 0.5kb upstream 0.5kb upstream 2760 true Chr19: 48806799-48809558 Glycine max
Glyma.19G240000 0.5kb upstream 0.5kb upstream 500 false Chr19: 48809059-48809558 Glycine max
Glyma.19G240000 0.5kb downstream 0.5kb downstream 2760 true Chr19: 48806299-48809058 Glycine max
Glyma.19G240000 0.5kb downstream 0.5kb downstream 500 false Chr19: 48806299-48806798 Glycine max
Glyma.19G240000 1.0kb upstream 1.0kb upstream 3260 true Chr19: 48806799-48810058 Glycine max
Glyma.19G240000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48809059-48810058 Glycine max
Glyma.19G240000 1.0kb downstream 1.0kb downstream 3260 true Chr19: 48805799-48809058 Glycine max
Glyma.19G240000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48805799-48806798 Glycine max
Glyma.19G240000 2.0kb upstream 2.0kb upstream 4260 true Chr19: 48806799-48811058 Glycine max
Glyma.19G240000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48809059-48811058 Glycine max
Glyma.19G240000 2.0kb downstream 2.0kb downstream 4260 true Chr19: 48804799-48809058 Glycine max
Glyma.19G240000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48804799-48806798 Glycine max
Glyma.19G240000 5.0kb upstream 5.0kb upstream 7260 true Chr19: 48806799-48814058 Glycine max
Glyma.19G240000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48809059-48814058 Glycine max
Glyma.19G240000 5.0kb downstream 5.0kb downstream 7260 true Chr19: 48801799-48809058 Glycine max
Glyma.19G240000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48801799-48806798 Glycine max
Glyma.19G240000 10.0kb upstream 10.0kb upstream 12260 true Chr19: 48806799-48819058 Glycine max
Glyma.19G240000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48809059-48819058 Glycine max
Glyma.19G240000 10.0kb downstream 10.0kb downstream 12260 true Chr19: 48796799-48809058 Glycine max
Glyma.19G240000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48796799-48806798 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302338 5265 Fabidae View MSA
124063659 5270 Rosid View MSA
123746706 5271 Pentapetalae View MSA
122792651 5272 Eudicot View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0674 0.0 62.6352   Low
cufflinks 28.7879 0.0 94.9815 High  
cufflinks 17.6729 0.0 60.8334   Low
cufflinks 32.4098 0.0 107.088 High  
cufflinks 32.2065 0.0 106.658 High  
cufflinks 37.0527 0.0 122.238 High High
cufflinks 32.42 0.0 108.316 High  
cufflinks 33.3765 0.0 110.444 High  
cufflinks 29.6329 0.0 98.9525 High  
cufflinks 5.517       High
cufflinks 2.168       Low
cufflinks 4.034        
cufflinks 5.851       High
cufflinks 7.163     High High
cufflinks 2.542       Low
cufflinks 3.545        
cufflinks 2.69        
cufflinks 5.124       High
cufflinks 4.902        
cufflinks 3.054        
cufflinks 3.028        
cufflinks 3.444        
cufflinks 3.481        
cufflinks 2.784        
cufflinks 3.627        
cufflinks 2.497       Low

0 Strain