Gene : Glyma.19G234200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22939:SF95 - SERINE PROTEASE HTRA2, MITOCHONDRIAL Genomic Order:  2342
Name:  ? Glyma.19G234200 Secondary Identifier:  ? PAC:30511795
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G234200 0.5kb upstream 0.5kb upstream 5363 true Chr19: 48388085-48393447 Glycine max
Glyma.19G234200 0.5kb upstream 0.5kb upstream 500 false Chr19: 48388085-48388584 Glycine max
Glyma.19G234200 0.5kb downstream 0.5kb downstream 5363 true Chr19: 48388585-48393947 Glycine max
Glyma.19G234200 0.5kb downstream 0.5kb downstream 500 false Chr19: 48393448-48393947 Glycine max
Glyma.19G234200 1.0kb upstream 1.0kb upstream 5863 true Chr19: 48387585-48393447 Glycine max
Glyma.19G234200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48387585-48388584 Glycine max
Glyma.19G234200 1.0kb downstream 1.0kb downstream 5863 true Chr19: 48388585-48394447 Glycine max
Glyma.19G234200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48393448-48394447 Glycine max
Glyma.19G234200 2.0kb upstream 2.0kb upstream 6863 true Chr19: 48386585-48393447 Glycine max
Glyma.19G234200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48386585-48388584 Glycine max
Glyma.19G234200 2.0kb downstream 2.0kb downstream 6863 true Chr19: 48388585-48395447 Glycine max
Glyma.19G234200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48393448-48395447 Glycine max
Glyma.19G234200 5.0kb upstream 5.0kb upstream 9863 true Chr19: 48383585-48393447 Glycine max
Glyma.19G234200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48383585-48388584 Glycine max
Glyma.19G234200 5.0kb downstream 5.0kb downstream 9863 true Chr19: 48388585-48398447 Glycine max
Glyma.19G234200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48393448-48398447 Glycine max
Glyma.19G234200 10.0kb upstream 10.0kb upstream 14863 true Chr19: 48378585-48393447 Glycine max
Glyma.19G234200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48378585-48388584 Glycine max
Glyma.19G234200 10.0kb downstream 10.0kb downstream 14863 true Chr19: 48388585-48403447 Glycine max
Glyma.19G234200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48393448-48403447 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308433 5265 Fabidae View MSA
124065784 5270 Rosid View MSA
123744381 5271 Pentapetalae View MSA
122797059 5272 Eudicot View MSA
122045030 5273 Angiosperm View MSA
121344976 5274 Embryophyte View MSA
123424771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.58258 0.0 17.1571    
cufflinks 10.9768 0.0 33.6405   High
cufflinks 3.10146 0.0 13.0408   Low
cufflinks 8.13436 0.0 30.4004    
cufflinks 13.3258 0.0 42.4507   High
cufflinks 5.30505 0.0 20.1919    
cufflinks 6.89497 0.0 23.0858    
cufflinks 7.2076 0.0 23.8447    
cufflinks 7.81267 0.0 25.3908    
cufflinks 1.356        
cufflinks 0.119       Low
cufflinks 1.109        
cufflinks 2.403       High
cufflinks 3.685       High
cufflinks 0.279        
cufflinks 1.289        
cufflinks 0.376        
cufflinks 1.568        
cufflinks 2.387       High
cufflinks 1.04        
cufflinks 0.207       Low
cufflinks 1.148        
cufflinks 1.789        
cufflinks 0.094       Low
cufflinks 1.213        
cufflinks 0.353        

0 Strain