Gene : Glyma.19G235000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10992:SF773 - PROTEIN AUXIN RESPONSE 4 Genomic Order:  2350
Name:  ? Glyma.19G235000 Secondary Identifier:  ? PAC:30514818
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G235000 0.5kb upstream 0.5kb upstream 3590 true Chr19: 48467656-48471245 Glycine max
Glyma.19G235000 0.5kb upstream 0.5kb upstream 500 false Chr19: 48470746-48471245 Glycine max
Glyma.19G235000 0.5kb downstream 0.5kb downstream 3590 true Chr19: 48467156-48470745 Glycine max
Glyma.19G235000 0.5kb downstream 0.5kb downstream 500 false Chr19: 48467156-48467655 Glycine max
Glyma.19G235000 1.0kb upstream 1.0kb upstream 4090 true Chr19: 48467656-48471745 Glycine max
Glyma.19G235000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48470746-48471745 Glycine max
Glyma.19G235000 1.0kb downstream 1.0kb downstream 4090 true Chr19: 48466656-48470745 Glycine max
Glyma.19G235000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48466656-48467655 Glycine max
Glyma.19G235000 2.0kb upstream 2.0kb upstream 5090 true Chr19: 48467656-48472745 Glycine max
Glyma.19G235000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48470746-48472745 Glycine max
Glyma.19G235000 2.0kb downstream 2.0kb downstream 5090 true Chr19: 48465656-48470745 Glycine max
Glyma.19G235000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48465656-48467655 Glycine max
Glyma.19G235000 5.0kb upstream 5.0kb upstream 8090 true Chr19: 48467656-48475745 Glycine max
Glyma.19G235000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48470746-48475745 Glycine max
Glyma.19G235000 5.0kb downstream 5.0kb downstream 8090 true Chr19: 48462656-48470745 Glycine max
Glyma.19G235000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48462656-48467655 Glycine max
Glyma.19G235000 10.0kb upstream 10.0kb upstream 13090 true Chr19: 48467656-48480745 Glycine max
Glyma.19G235000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48470746-48480745 Glycine max
Glyma.19G235000 10.0kb downstream 10.0kb downstream 13090 true Chr19: 48457656-48470745 Glycine max
Glyma.19G235000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48457656-48467655 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300656 5265 Fabidae View MSA
124064720 5270 Rosid View MSA
123737240 5271 Pentapetalae View MSA
122791841 5272 Eudicot View MSA
122047835 5273 Angiosperm View MSA
121347873 5274 Embryophyte View MSA
123380660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2942 0.0 38.1598    
cufflinks 10.9496 0.0 29.4628    
cufflinks 7.84709 0.0 21.5115   Low
cufflinks 15.5885 0.0 41.5916    
cufflinks 19.7708 0.0 52.8928   High
cufflinks 13.1409 0.0 35.1292    
cufflinks 11.6807 0.0 31.2869    
cufflinks 22.1552 0.0 59.42 High High
cufflinks 11.259 0.0 30.224    
cufflinks 12.948     High High
cufflinks 2.25       Low
cufflinks 5.905        
cufflinks 13.294     High High
cufflinks 18.356     High High
cufflinks 2.33       Low
cufflinks 5.768        
cufflinks 4.541        
cufflinks 6.019        
cufflinks 9.503     High  
cufflinks 5.107        
cufflinks 4.252        
cufflinks 6.029        
cufflinks 6.434        
cufflinks 3.252       Low
cufflinks 5.045        
cufflinks 5.218        

0 Strain