Gene : Glyma.19G228900 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4727 - U1-like Zn-finger protein Genomic Order:  2289
Name:  ? Glyma.19G228900 Secondary Identifier:  ? PAC:30511337
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G228900 0.5kb upstream 0.5kb upstream 3944 true Chr19: 48014375-48018318 Glycine max
Glyma.19G228900 0.5kb upstream 0.5kb upstream 500 false Chr19: 48017819-48018318 Glycine max
Glyma.19G228900 0.5kb downstream 0.5kb downstream 3944 true Chr19: 48013875-48017818 Glycine max
Glyma.19G228900 0.5kb downstream 0.5kb downstream 500 false Chr19: 48013875-48014374 Glycine max
Glyma.19G228900 1.0kb upstream 1.0kb upstream 4444 true Chr19: 48014375-48018818 Glycine max
Glyma.19G228900 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48017819-48018818 Glycine max
Glyma.19G228900 1.0kb downstream 1.0kb downstream 4444 true Chr19: 48013375-48017818 Glycine max
Glyma.19G228900 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48013375-48014374 Glycine max
Glyma.19G228900 2.0kb upstream 2.0kb upstream 5444 true Chr19: 48014375-48019818 Glycine max
Glyma.19G228900 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48017819-48019818 Glycine max
Glyma.19G228900 2.0kb downstream 2.0kb downstream 5444 true Chr19: 48012375-48017818 Glycine max
Glyma.19G228900 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48012375-48014374 Glycine max
Glyma.19G228900 5.0kb upstream 5.0kb upstream 8444 true Chr19: 48014375-48022818 Glycine max
Glyma.19G228900 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48017819-48022818 Glycine max
Glyma.19G228900 5.0kb downstream 5.0kb downstream 8444 true Chr19: 48009375-48017818 Glycine max
Glyma.19G228900 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48009375-48014374 Glycine max
Glyma.19G228900 10.0kb upstream 10.0kb upstream 13444 true Chr19: 48014375-48027818 Glycine max
Glyma.19G228900 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48017819-48027818 Glycine max
Glyma.19G228900 10.0kb downstream 10.0kb downstream 13444 true Chr19: 48004375-48017818 Glycine max
Glyma.19G228900 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48004375-48014374 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314756 5265 Fabidae View MSA
124068799 5270 Rosid View MSA
123739727 5271 Pentapetalae View MSA
122792158 5272 Eudicot View MSA
122047848 5273 Angiosperm View MSA
121346040 5274 Embryophyte View MSA
123426715 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.26711 0.0 18.1295   Low
cufflinks 8.97925 0.0 24.9576    
cufflinks 8.09754 0.0 22.7085    
cufflinks 7.18207 0.0 20.4091    
cufflinks 7.47421 0.0 21.1663    
cufflinks 11.5635 0.0 31.5224   High
cufflinks 8.42798 0.0 23.6136    
cufflinks 8.72115 0.0 24.2803    
cufflinks 7.40746 0.0 20.9882    
cufflinks 2.437        
cufflinks 1.772       Low
cufflinks 3.382        
cufflinks 3.158        
cufflinks 3.738       High
cufflinks 1.546       Low
cufflinks 2.77        
cufflinks 1.526       Low
cufflinks 3.351        
cufflinks 3.208        
cufflinks 2.588        
cufflinks 2.094        
cufflinks 2.739        
cufflinks 3.191        
cufflinks 2.512        
cufflinks 2.92        
cufflinks 2.586        

0 Strain