Gene : Glyma.19G230000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR13058 - THREE PRIME REPAIR EXONUCLEASE 1, 2 Genomic Order:  2300
Name:  ? Glyma.19G230000 Secondary Identifier:  ? PAC:30513928
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G230000 0.5kb upstream 0.5kb upstream 3600 true Chr19: 48084144-48087743 Glycine max
Glyma.19G230000 0.5kb upstream 0.5kb upstream 500 false Chr19: 48084144-48084643 Glycine max
Glyma.19G230000 0.5kb downstream 0.5kb downstream 3600 true Chr19: 48084644-48088243 Glycine max
Glyma.19G230000 0.5kb downstream 0.5kb downstream 500 false Chr19: 48087744-48088243 Glycine max
Glyma.19G230000 1.0kb upstream 1.0kb upstream 4100 true Chr19: 48083644-48087743 Glycine max
Glyma.19G230000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 48083644-48084643 Glycine max
Glyma.19G230000 1.0kb downstream 1.0kb downstream 4100 true Chr19: 48084644-48088743 Glycine max
Glyma.19G230000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 48087744-48088743 Glycine max
Glyma.19G230000 2.0kb upstream 2.0kb upstream 5100 true Chr19: 48082644-48087743 Glycine max
Glyma.19G230000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 48082644-48084643 Glycine max
Glyma.19G230000 2.0kb downstream 2.0kb downstream 5100 true Chr19: 48084644-48089743 Glycine max
Glyma.19G230000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 48087744-48089743 Glycine max
Glyma.19G230000 5.0kb upstream 5.0kb upstream 8100 true Chr19: 48079644-48087743 Glycine max
Glyma.19G230000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 48079644-48084643 Glycine max
Glyma.19G230000 5.0kb downstream 5.0kb downstream 8100 true Chr19: 48084644-48092743 Glycine max
Glyma.19G230000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 48087744-48092743 Glycine max
Glyma.19G230000 10.0kb upstream 10.0kb upstream 13100 true Chr19: 48074644-48087743 Glycine max
Glyma.19G230000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 48074644-48084643 Glycine max
Glyma.19G230000 10.0kb downstream 10.0kb downstream 13100 true Chr19: 48084644-48097743 Glycine max
Glyma.19G230000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 48087744-48097743 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305666 5265 Fabidae View MSA
124060599 5270 Rosid View MSA
123737222 5271 Pentapetalae View MSA
122794148 5272 Eudicot View MSA
122047735 5273 Angiosperm View MSA
121310783 5274 Embryophyte View MSA
123348185 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.7453 0.0 6.17407   Low
cufflinks 1.87894 0.0 6.60076    
cufflinks 8.72603 0.0 25.1233   High
cufflinks 3.21458 0.0 10.6574    
cufflinks 2.63549 0.0 8.97869    
cufflinks 3.53946 0.0 11.6102    
cufflinks 1.8948 0.0 6.6617    
cufflinks 2.88751 0.0 9.69873    
cufflinks 2.75046 0.0 9.30492    
cufflinks 1.11        
cufflinks 0.139       Low
cufflinks 5.313       High
cufflinks 1.765        
cufflinks 1.994        
cufflinks 0.291        
cufflinks 0.389        
cufflinks 0.422        
cufflinks 13.29     High High
cufflinks 0.517        
cufflinks 0.523        
cufflinks 0.278        
cufflinks 0.579        
cufflinks 0.386        
cufflinks 0.228        
cufflinks 0.414        
cufflinks 0.369        

0 Strain