Gene : Glyma.20G001300 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR13140:SF384 - MYOSIN-2 Genomic Order:  13
Name:  ? Glyma.20G001300 Secondary Identifier:  ? PAC:30522018
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G001300 0.5kb upstream 0.5kb upstream 17874 true Chr20: 124660-142533 Glycine max
Glyma.20G001300 0.5kb upstream 0.5kb upstream 500 false Chr20: 142034-142533 Glycine max
Glyma.20G001300 0.5kb downstream 0.5kb downstream 17874 true Chr20: 124160-142033 Glycine max
Glyma.20G001300 0.5kb downstream 0.5kb downstream 500 false Chr20: 124160-124659 Glycine max
Glyma.20G001300 1.0kb upstream 1.0kb upstream 18374 true Chr20: 124660-143033 Glycine max
Glyma.20G001300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 142034-143033 Glycine max
Glyma.20G001300 1.0kb downstream 1.0kb downstream 18374 true Chr20: 123660-142033 Glycine max
Glyma.20G001300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 123660-124659 Glycine max
Glyma.20G001300 2.0kb upstream 2.0kb upstream 19374 true Chr20: 124660-144033 Glycine max
Glyma.20G001300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 142034-144033 Glycine max
Glyma.20G001300 2.0kb downstream 2.0kb downstream 19374 true Chr20: 122660-142033 Glycine max
Glyma.20G001300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 122660-124659 Glycine max
Glyma.20G001300 5.0kb upstream 5.0kb upstream 22374 true Chr20: 124660-147033 Glycine max
Glyma.20G001300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 142034-147033 Glycine max
Glyma.20G001300 5.0kb downstream 5.0kb downstream 22374 true Chr20: 119660-142033 Glycine max
Glyma.20G001300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 119660-124659 Glycine max
Glyma.20G001300 10.0kb upstream 10.0kb upstream 27374 true Chr20: 124660-152033 Glycine max
Glyma.20G001300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 142034-152033 Glycine max
Glyma.20G001300 10.0kb downstream 10.0kb downstream 27374 true Chr20: 114660-142033 Glycine max
Glyma.20G001300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 114660-124659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310058 5265 Fabidae View MSA
124066998 5270 Rosid View MSA
123737228 5271 Pentapetalae View MSA
122787134 5272 Eudicot View MSA
122049151 5273 Angiosperm View MSA
121347922 5274 Embryophyte View MSA
123426444 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.4782 0.0 26.5784    
cufflinks 6.60984 0.0 24.7175    
cufflinks 7.60778 0.0 28.4354   High
cufflinks 6.10688 0.0 24.9137    
cufflinks 4.55089 0.0 15.9161   Low
cufflinks 5.81544 0.0 22.2441    
cufflinks 3.81934 0.0 11.7614   Low
cufflinks 7.53489 0.0 31.0887   High
cufflinks 5.17474 0.0 19.4755    
cufflinks 0.999        
cufflinks 0.602        
cufflinks 0.893        
cufflinks 0.673        
cufflinks 0.436       Low
cufflinks 0.222       Low
cufflinks 0.837        
cufflinks 0.722        
cufflinks 1.252       High
cufflinks 1.023        
cufflinks 0.876        
cufflinks 0.749        
cufflinks 0.956        
cufflinks 0.732        
cufflinks 1.427       High
cufflinks 0.892        
cufflinks 1.242       High

0 Strain