Gene : Glyma.20G002500 G. max Wm82.a2.v1
Defline:  (1 of 65) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  25
Name:  ? Glyma.20G002500 Secondary Identifier:  ? PAC:30520145
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G002500 0.5kb upstream 0.5kb upstream 1205 true Chr20: 241013-242217 Glycine max
Glyma.20G002500 0.5kb upstream 0.5kb upstream 500 false Chr20: 241718-242217 Glycine max
Glyma.20G002500 0.5kb downstream 0.5kb downstream 1205 true Chr20: 240513-241717 Glycine max
Glyma.20G002500 0.5kb downstream 0.5kb downstream 500 false Chr20: 240513-241012 Glycine max
Glyma.20G002500 1.0kb upstream 1.0kb upstream 1705 true Chr20: 241013-242717 Glycine max
Glyma.20G002500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 241718-242717 Glycine max
Glyma.20G002500 1.0kb downstream 1.0kb downstream 1705 true Chr20: 240013-241717 Glycine max
Glyma.20G002500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 240013-241012 Glycine max
Glyma.20G002500 2.0kb upstream 2.0kb upstream 2705 true Chr20: 241013-243717 Glycine max
Glyma.20G002500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 241718-243717 Glycine max
Glyma.20G002500 2.0kb downstream 2.0kb downstream 2705 true Chr20: 239013-241717 Glycine max
Glyma.20G002500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 239013-241012 Glycine max
Glyma.20G002500 5.0kb upstream 5.0kb upstream 5705 true Chr20: 241013-246717 Glycine max
Glyma.20G002500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 241718-246717 Glycine max
Glyma.20G002500 5.0kb downstream 5.0kb downstream 5705 true Chr20: 236013-241717 Glycine max
Glyma.20G002500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 236013-241012 Glycine max
Glyma.20G002500 10.0kb upstream 10.0kb upstream 10705 true Chr20: 241013-251717 Glycine max
Glyma.20G002500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 241718-251717 Glycine max
Glyma.20G002500 10.0kb downstream 10.0kb downstream 10705 true Chr20: 231013-241717 Glycine max
Glyma.20G002500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 231013-241012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306932 5265 Fabidae View MSA
124066569 5270 Rosid View MSA
123738902 5271 Pentapetalae View MSA
122788328 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0816802 0.0 0.341819 Low High
cufflinks 0.0604538 0.0 0.259076 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0571047 0.0 0.244924 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.169        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.244       High
cufflinks 0.154        
cufflinks 0.106        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114        
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low Low
cufflinks 0.027     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.065     Low  

0 Strain