Gene : Glyma.19G260000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11516:SF25 - PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA-3, CHLOROPLASTIC Genomic Order:  2600
Name:  ? Glyma.19G260000 Secondary Identifier:  ? PAC:30514362
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5173 Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PYRUVDEHYD-PWY Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G260000 0.5kb upstream 0.5kb upstream 4530 true Chr19: 50348354-50352883 Glycine max
Glyma.19G260000 0.5kb upstream 0.5kb upstream 500 false Chr19: 50348354-50348853 Glycine max
Glyma.19G260000 0.5kb downstream 0.5kb downstream 4530 true Chr19: 50348854-50353383 Glycine max
Glyma.19G260000 0.5kb downstream 0.5kb downstream 500 false Chr19: 50352884-50353383 Glycine max
Glyma.19G260000 1.0kb upstream 1.0kb upstream 5030 true Chr19: 50347854-50352883 Glycine max
Glyma.19G260000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 50347854-50348853 Glycine max
Glyma.19G260000 1.0kb downstream 1.0kb downstream 5030 true Chr19: 50348854-50353883 Glycine max
Glyma.19G260000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 50352884-50353883 Glycine max
Glyma.19G260000 2.0kb upstream 2.0kb upstream 6030 true Chr19: 50346854-50352883 Glycine max
Glyma.19G260000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 50346854-50348853 Glycine max
Glyma.19G260000 2.0kb downstream 2.0kb downstream 6030 true Chr19: 50348854-50354883 Glycine max
Glyma.19G260000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 50352884-50354883 Glycine max
Glyma.19G260000 5.0kb upstream 5.0kb upstream 9030 true Chr19: 50343854-50352883 Glycine max
Glyma.19G260000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 50343854-50348853 Glycine max
Glyma.19G260000 5.0kb downstream 5.0kb downstream 9030 true Chr19: 50348854-50357883 Glycine max
Glyma.19G260000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 50352884-50357883 Glycine max
Glyma.19G260000 10.0kb upstream 10.0kb upstream 14030 true Chr19: 50338854-50352883 Glycine max
Glyma.19G260000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 50338854-50348853 Glycine max
Glyma.19G260000 10.0kb downstream 10.0kb downstream 14030 true Chr19: 50348854-50362883 Glycine max
Glyma.19G260000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 50352884-50362883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309169 5265 Fabidae View MSA
124066481 5270 Rosid View MSA
123745685 5271 Pentapetalae View MSA
122791580 5272 Eudicot View MSA
122044804 5273 Angiosperm View MSA
121347425 5274 Embryophyte View MSA
123423942 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06963 0.0 10.4037   Low
cufflinks 7.3525 0.0 23.6084   High
cufflinks 2.04374 0.0 7.17832   Low
cufflinks 4.60166 0.0 16.4939    
cufflinks 3.89818 0.0 14.5652    
cufflinks 4.20057 0.0 15.3618    
cufflinks 5.84313 0.0 24.4129   High
cufflinks 3.72231 0.0 14.1797    
cufflinks 2.42561 0.0 8.09997    
cufflinks 1.031        
cufflinks 0.125       Low
cufflinks 0.862        
cufflinks 0.869        
cufflinks 1.497        
cufflinks 0.139       Low
cufflinks 1.363        
cufflinks 0.305        
cufflinks 3.176       High
cufflinks 2.701       High
cufflinks 1.048        
cufflinks 0.262       Low
cufflinks 1.346        
cufflinks 1.719        
cufflinks 0.257       Low
cufflinks 1.365        
cufflinks 0.351        

0 Strain