Gene : Glyma.19G252400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21668 - EIF-1A Genomic Order:  2524
Name:  ? Glyma.19G252400 Secondary Identifier:  ? PAC:30512922
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G252400 0.5kb upstream 0.5kb upstream 1914 true Chr19: 49781545-49783458 Glycine max
Glyma.19G252400 0.5kb upstream 0.5kb upstream 500 false Chr19: 49782959-49783458 Glycine max
Glyma.19G252400 0.5kb downstream 0.5kb downstream 1914 true Chr19: 49781045-49782958 Glycine max
Glyma.19G252400 0.5kb downstream 0.5kb downstream 500 false Chr19: 49781045-49781544 Glycine max
Glyma.19G252400 1.0kb upstream 1.0kb upstream 2414 true Chr19: 49781545-49783958 Glycine max
Glyma.19G252400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49782959-49783958 Glycine max
Glyma.19G252400 1.0kb downstream 1.0kb downstream 2414 true Chr19: 49780545-49782958 Glycine max
Glyma.19G252400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49780545-49781544 Glycine max
Glyma.19G252400 2.0kb upstream 2.0kb upstream 3414 true Chr19: 49781545-49784958 Glycine max
Glyma.19G252400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49782959-49784958 Glycine max
Glyma.19G252400 2.0kb downstream 2.0kb downstream 3414 true Chr19: 49779545-49782958 Glycine max
Glyma.19G252400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49779545-49781544 Glycine max
Glyma.19G252400 5.0kb upstream 5.0kb upstream 6414 true Chr19: 49781545-49787958 Glycine max
Glyma.19G252400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49782959-49787958 Glycine max
Glyma.19G252400 5.0kb downstream 5.0kb downstream 6414 true Chr19: 49776545-49782958 Glycine max
Glyma.19G252400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49776545-49781544 Glycine max
Glyma.19G252400 10.0kb upstream 10.0kb upstream 11414 true Chr19: 49781545-49792958 Glycine max
Glyma.19G252400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49782959-49792958 Glycine max
Glyma.19G252400 10.0kb downstream 10.0kb downstream 11414 true Chr19: 49771545-49782958 Glycine max
Glyma.19G252400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49771545-49781544 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254109 5265 Fabidae View MSA
124067350 5270 Rosid View MSA
123749124 5271 Pentapetalae View MSA
122789078 5272 Eudicot View MSA
122047152 5273 Angiosperm View MSA
121349077 5274 Embryophyte View MSA
123428812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.6265 0.0 199.624 High  
cufflinks 42.8017 0.0 154.918 High  
cufflinks 62.6239 0.0 245.808 High  
cufflinks 32.1051 0.0 113.096 High Low
cufflinks 58.8599 0.0 230.916 High  
cufflinks 86.2111 0.0 372.997 High High
cufflinks 40.2659 0.0 145.555 High  
cufflinks 59.8076 0.0 231.116 High  
cufflinks 42.5863 0.0 154.969 High  
cufflinks 18.286     High  
cufflinks 12.658     High  
cufflinks 15.372     High  
cufflinks 18.813     High High
cufflinks 19.378     High High
cufflinks 9.343     High Low
cufflinks 13.169     High  
cufflinks 27.664     High High
cufflinks 10.102     High Low
cufflinks 16.681     High  
cufflinks 10.356     High  
cufflinks 8.838     High Low
cufflinks 12.443     High  
cufflinks 12.837     High  
cufflinks 14.356     High  
cufflinks 10.425     High  
cufflinks 14.876     High  

0 Strain