Gene : Glyma.19G253100 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  2531
Name:  ? Glyma.19G253100 Secondary Identifier:  ? PAC:30511627
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G253100 0.5kb upstream 0.5kb upstream 1382 true Chr19: 49846390-49847771 Glycine max
Glyma.19G253100 0.5kb upstream 0.5kb upstream 500 false Chr19: 49846390-49846889 Glycine max
Glyma.19G253100 0.5kb downstream 0.5kb downstream 1382 true Chr19: 49846890-49848271 Glycine max
Glyma.19G253100 0.5kb downstream 0.5kb downstream 500 false Chr19: 49847772-49848271 Glycine max
Glyma.19G253100 1.0kb upstream 1.0kb upstream 1882 true Chr19: 49845890-49847771 Glycine max
Glyma.19G253100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 49845890-49846889 Glycine max
Glyma.19G253100 1.0kb downstream 1.0kb downstream 1882 true Chr19: 49846890-49848771 Glycine max
Glyma.19G253100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 49847772-49848771 Glycine max
Glyma.19G253100 2.0kb upstream 2.0kb upstream 2882 true Chr19: 49844890-49847771 Glycine max
Glyma.19G253100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 49844890-49846889 Glycine max
Glyma.19G253100 2.0kb downstream 2.0kb downstream 2882 true Chr19: 49846890-49849771 Glycine max
Glyma.19G253100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 49847772-49849771 Glycine max
Glyma.19G253100 5.0kb upstream 5.0kb upstream 5882 true Chr19: 49841890-49847771 Glycine max
Glyma.19G253100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 49841890-49846889 Glycine max
Glyma.19G253100 5.0kb downstream 5.0kb downstream 5882 true Chr19: 49846890-49852771 Glycine max
Glyma.19G253100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 49847772-49852771 Glycine max
Glyma.19G253100 10.0kb upstream 10.0kb upstream 10882 true Chr19: 49836890-49847771 Glycine max
Glyma.19G253100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 49836890-49846889 Glycine max
Glyma.19G253100 10.0kb downstream 10.0kb downstream 10882 true Chr19: 49846890-49857771 Glycine max
Glyma.19G253100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 49847772-49857771 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254628 5265 Fabidae View MSA
124072043 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0242138 0.0 0.109508 Low  
cufflinks 0.0930007 0.0 0.379422 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.102961 0.0 0.417756 Low High
cufflinks 0.0410772 0.0 0.177368 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0232636 0.0 0.10529 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.137       High
cufflinks 0.065     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain