Gene : Glyma.20G021700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21426:SF2 - EXOCYST COMPLEX COMPONENT EXO84C Genomic Order:  217
Name:  ? Glyma.20G021700 Secondary Identifier:  ? PAC:30523032
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G021700 0.5kb upstream 0.5kb upstream 6031 true Chr20: 2205008-2211038 Glycine max
Glyma.20G021700 0.5kb upstream 0.5kb upstream 500 false Chr20: 2210539-2211038 Glycine max
Glyma.20G021700 0.5kb downstream 0.5kb downstream 6031 true Chr20: 2204508-2210538 Glycine max
Glyma.20G021700 0.5kb downstream 0.5kb downstream 500 false Chr20: 2204508-2205007 Glycine max
Glyma.20G021700 1.0kb upstream 1.0kb upstream 6531 true Chr20: 2205008-2211538 Glycine max
Glyma.20G021700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2210539-2211538 Glycine max
Glyma.20G021700 1.0kb downstream 1.0kb downstream 6531 true Chr20: 2204008-2210538 Glycine max
Glyma.20G021700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2204008-2205007 Glycine max
Glyma.20G021700 2.0kb upstream 2.0kb upstream 7531 true Chr20: 2205008-2212538 Glycine max
Glyma.20G021700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2210539-2212538 Glycine max
Glyma.20G021700 2.0kb downstream 2.0kb downstream 7531 true Chr20: 2203008-2210538 Glycine max
Glyma.20G021700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2203008-2205007 Glycine max
Glyma.20G021700 5.0kb upstream 5.0kb upstream 10531 true Chr20: 2205008-2215538 Glycine max
Glyma.20G021700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2210539-2215538 Glycine max
Glyma.20G021700 5.0kb downstream 5.0kb downstream 10531 true Chr20: 2200008-2210538 Glycine max
Glyma.20G021700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2200008-2205007 Glycine max
Glyma.20G021700 10.0kb upstream 10.0kb upstream 15531 true Chr20: 2205008-2220538 Glycine max
Glyma.20G021700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2210539-2220538 Glycine max
Glyma.20G021700 10.0kb downstream 10.0kb downstream 15531 true Chr20: 2195008-2210538 Glycine max
Glyma.20G021700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2195008-2205007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303815 5265 Fabidae View MSA
124065618 5270 Rosid View MSA
123739809 5271 Pentapetalae View MSA
122787186 5272 Eudicot View MSA
122042484 5273 Angiosperm View MSA
121309976 5274 Embryophyte View MSA
123347590 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91254 0.0 24.778    
cufflinks 9.17936 0.0 33.8275    
cufflinks 3.93659 0.0 17.5914   Low
cufflinks 7.31449 0.0 33.5964    
cufflinks 5.96411 0.0 26.1793    
cufflinks 5.98965 0.0 21.3561    
cufflinks 19.792 0.0 89.1955   High
cufflinks 6.42573 0.0 31.3036    
cufflinks 5.50003 0.0 30.0721    
cufflinks 1.153        
cufflinks 0.246       Low
cufflinks 1.167        
cufflinks 1.397        
cufflinks 1.835       High
cufflinks 0.31       Low
cufflinks 0.884        
cufflinks 0.364       Low
cufflinks 1.49       High
cufflinks 1.744       High
cufflinks 0.864        
cufflinks 0.353       Low
cufflinks 0.936        
cufflinks 1.094        
cufflinks 0.404        
cufflinks 0.753        
cufflinks 0.353       Low

0 Strain