Gene : Glyma.20G020400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31521:SF2 - EXPRESSED PROTEIN Genomic Order:  204
Name:  ? Glyma.20G020400 Secondary Identifier:  ? PAC:30521318
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G020400 0.5kb upstream 0.5kb upstream 11145 true Chr20: 2099245-2110389 Glycine max
Glyma.20G020400 0.5kb upstream 0.5kb upstream 500 false Chr20: 2099245-2099744 Glycine max
Glyma.20G020400 0.5kb downstream 0.5kb downstream 11145 true Chr20: 2099745-2110889 Glycine max
Glyma.20G020400 0.5kb downstream 0.5kb downstream 500 false Chr20: 2110390-2110889 Glycine max
Glyma.20G020400 1.0kb upstream 1.0kb upstream 11645 true Chr20: 2098745-2110389 Glycine max
Glyma.20G020400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2098745-2099744 Glycine max
Glyma.20G020400 1.0kb downstream 1.0kb downstream 11645 true Chr20: 2099745-2111389 Glycine max
Glyma.20G020400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2110390-2111389 Glycine max
Glyma.20G020400 2.0kb upstream 2.0kb upstream 12645 true Chr20: 2097745-2110389 Glycine max
Glyma.20G020400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2097745-2099744 Glycine max
Glyma.20G020400 2.0kb downstream 2.0kb downstream 12645 true Chr20: 2099745-2112389 Glycine max
Glyma.20G020400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2110390-2112389 Glycine max
Glyma.20G020400 5.0kb upstream 5.0kb upstream 15645 true Chr20: 2094745-2110389 Glycine max
Glyma.20G020400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2094745-2099744 Glycine max
Glyma.20G020400 5.0kb downstream 5.0kb downstream 15645 true Chr20: 2099745-2115389 Glycine max
Glyma.20G020400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2110390-2115389 Glycine max
Glyma.20G020400 10.0kb upstream 10.0kb upstream 20645 true Chr20: 2089745-2110389 Glycine max
Glyma.20G020400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2089745-2099744 Glycine max
Glyma.20G020400 10.0kb downstream 10.0kb downstream 20645 true Chr20: 2099745-2120389 Glycine max
Glyma.20G020400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2110390-2120389 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309121 5265 Fabidae View MSA
124069914 5270 Rosid View MSA
123749544 5271 Pentapetalae View MSA
122793000 5272 Eudicot View MSA
122042486 5273 Angiosperm View MSA
121345558 5274 Embryophyte View MSA
123380236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.52148 0.0 20.2818    
cufflinks 7.83171 0.0 21.0736    
cufflinks 4.89354 0.0 13.5398    
cufflinks 6.42658 0.0 17.4562    
cufflinks 13.2209 0.0 35.2901    
cufflinks 61.0875 0.0 188.66 High High
cufflinks 5.18205 0.0 14.3256    
cufflinks 18.6808 0.0 50.4335    
cufflinks 6.46451 0.0 17.5578    
cufflinks 2.696        
cufflinks 0.059       Low
cufflinks 1.691        
cufflinks 2.341        
cufflinks 1.112        
cufflinks 0.396        
cufflinks 1.833        
cufflinks 0.694        
cufflinks 2.269        
cufflinks 2.207        
cufflinks 2.238        
cufflinks 0.082       Low
cufflinks 2.637        
cufflinks 2.17        
cufflinks 0.116       Low
cufflinks 1.989        
cufflinks 0.228       Low

0 Strain