Gene : Glyma.20G012200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Genomic Order:  122
Name:  ? Glyma.20G012200 Secondary Identifier:  ? PAC:30522188
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G012200 0.5kb upstream 0.5kb upstream 6070 true Chr20: 1019254-1025323 Glycine max
Glyma.20G012200 0.5kb upstream 0.5kb upstream 500 false Chr20: 1019254-1019753 Glycine max
Glyma.20G012200 0.5kb downstream 0.5kb downstream 6070 true Chr20: 1019754-1025823 Glycine max
Glyma.20G012200 0.5kb downstream 0.5kb downstream 500 false Chr20: 1025324-1025823 Glycine max
Glyma.20G012200 1.0kb upstream 1.0kb upstream 6570 true Chr20: 1018754-1025323 Glycine max
Glyma.20G012200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 1018754-1019753 Glycine max
Glyma.20G012200 1.0kb downstream 1.0kb downstream 6570 true Chr20: 1019754-1026323 Glycine max
Glyma.20G012200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 1025324-1026323 Glycine max
Glyma.20G012200 2.0kb upstream 2.0kb upstream 7570 true Chr20: 1017754-1025323 Glycine max
Glyma.20G012200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 1017754-1019753 Glycine max
Glyma.20G012200 2.0kb downstream 2.0kb downstream 7570 true Chr20: 1019754-1027323 Glycine max
Glyma.20G012200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 1025324-1027323 Glycine max
Glyma.20G012200 5.0kb upstream 5.0kb upstream 10570 true Chr20: 1014754-1025323 Glycine max
Glyma.20G012200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 1014754-1019753 Glycine max
Glyma.20G012200 5.0kb downstream 5.0kb downstream 10570 true Chr20: 1019754-1030323 Glycine max
Glyma.20G012200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 1025324-1030323 Glycine max
Glyma.20G012200 10.0kb upstream 10.0kb upstream 15570 true Chr20: 1009754-1025323 Glycine max
Glyma.20G012200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 1009754-1019753 Glycine max
Glyma.20G012200 10.0kb downstream 10.0kb downstream 15570 true Chr20: 1019754-1035323 Glycine max
Glyma.20G012200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 1025324-1035323 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121606911 5273 Angiosperm Singleton cluster - no MSA
122238023 5265 Fabidae Singleton cluster - no MSA
123983504 5270 Rosid Singleton cluster - no MSA
123559111 5271 Pentapetalae Singleton cluster - no MSA
122593918 5272 Eudicot Singleton cluster - no MSA
120879196 5274 Embryophyte Singleton cluster - no MSA
122920074 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148367 0.0 0.597921 Low  
cufflinks 0.494714 0.0 1.90422   High
cufflinks 0.490129 0.0 1.88614   High
cufflinks 0.27415 0.0 1.07973    
cufflinks 0.12693 0.0 0.514782 Low  
cufflinks 0.0570295 0.0 0.243454 Low Low
cufflinks 0.365821 0.0 1.42428    
cufflinks 0.0860133 0.0 0.355984 Low Low
cufflinks 0.25848 0.0 1.01971 Low  
cufflinks 0.18        
cufflinks 0.024     Low Low
cufflinks 0.149        
cufflinks 0.124        
cufflinks 0.074        
cufflinks 0.057        
cufflinks 0.175        
cufflinks 0.033     Low Low
cufflinks 0.198       High
cufflinks 0.216       High
cufflinks 0.1        
cufflinks 0.039     Low Low
cufflinks 0.163        
cufflinks 0.211       High
cufflinks 0.024     Low Low
cufflinks 0.132        
cufflinks 0.051     Low  

0 Strain