Gene : Glyma.20G014100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10882 - DIPHTHINE SYNTHASE Genomic Order:  141
Name:  ? Glyma.20G014100 Secondary Identifier:  ? PAC:30522439
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G014100 0.5kb upstream 0.5kb upstream 3435 true Chr20: 1245193-1248627 Glycine max
Glyma.20G014100 0.5kb upstream 0.5kb upstream 500 false Chr20: 1248128-1248627 Glycine max
Glyma.20G014100 0.5kb downstream 0.5kb downstream 3435 true Chr20: 1244693-1248127 Glycine max
Glyma.20G014100 0.5kb downstream 0.5kb downstream 500 false Chr20: 1244693-1245192 Glycine max
Glyma.20G014100 1.0kb upstream 1.0kb upstream 3935 true Chr20: 1245193-1249127 Glycine max
Glyma.20G014100 1.0kb upstream 1.0kb upstream 1000 false Chr20: 1248128-1249127 Glycine max
Glyma.20G014100 1.0kb downstream 1.0kb downstream 3935 true Chr20: 1244193-1248127 Glycine max
Glyma.20G014100 1.0kb downstream 1.0kb downstream 1000 false Chr20: 1244193-1245192 Glycine max
Glyma.20G014100 2.0kb upstream 2.0kb upstream 4935 true Chr20: 1245193-1250127 Glycine max
Glyma.20G014100 2.0kb upstream 2.0kb upstream 2000 false Chr20: 1248128-1250127 Glycine max
Glyma.20G014100 2.0kb downstream 2.0kb downstream 4935 true Chr20: 1243193-1248127 Glycine max
Glyma.20G014100 2.0kb downstream 2.0kb downstream 2000 false Chr20: 1243193-1245192 Glycine max
Glyma.20G014100 5.0kb upstream 5.0kb upstream 7935 true Chr20: 1245193-1253127 Glycine max
Glyma.20G014100 5.0kb upstream 5.0kb upstream 5000 false Chr20: 1248128-1253127 Glycine max
Glyma.20G014100 5.0kb downstream 5.0kb downstream 7935 true Chr20: 1240193-1248127 Glycine max
Glyma.20G014100 5.0kb downstream 5.0kb downstream 5000 false Chr20: 1240193-1245192 Glycine max
Glyma.20G014100 10.0kb upstream 10.0kb upstream 12935 true Chr20: 1245193-1258127 Glycine max
Glyma.20G014100 10.0kb upstream 10.0kb upstream 10000 false Chr20: 1248128-1258127 Glycine max
Glyma.20G014100 10.0kb downstream 10.0kb downstream 12935 true Chr20: 1235193-1248127 Glycine max
Glyma.20G014100 10.0kb downstream 10.0kb downstream 10000 false Chr20: 1235193-1245192 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304341 5265 Fabidae View MSA
124063616 5270 Rosid View MSA
123740790 5271 Pentapetalae View MSA
122786198 5272 Eudicot View MSA
122041685 5273 Angiosperm View MSA
121345013 5274 Embryophyte View MSA
123423829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.38556 0.0 20.4471    
cufflinks 4.24019 0.0 17.2053    
cufflinks 2.05999 0.0 10.5555   Low
cufflinks 3.69558 0.0 15.6755    
cufflinks 8.03293 0.0 31.8042   High
cufflinks 4.76994 0.0 18.8004    
cufflinks 5.01098 0.0 19.3897    
cufflinks 4.92552 0.0 19.1049    
cufflinks 4.83879 0.0 19.0149    
cufflinks 0.833        
cufflinks 0.382       Low
cufflinks 0.568        
cufflinks 2.201       High
cufflinks 2.887       High
cufflinks 0.706        
cufflinks 0.889        
cufflinks 0.636        
cufflinks 0.694        
cufflinks 1.156        
cufflinks 0.769        
cufflinks 0.603        
cufflinks 0.812        
cufflinks 1.051        
cufflinks 0.644        
cufflinks 0.752        
cufflinks 0.701        

0 Strain