Gene : Glyma.20G005600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Genomic Order:  56
Name:  ? Glyma.20G005600 Secondary Identifier:  ? PAC:30521885
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G005600 0.5kb upstream 0.5kb upstream 5184 true Chr20: 531811-536994 Glycine max
Glyma.20G005600 0.5kb upstream 0.5kb upstream 500 false Chr20: 531811-532310 Glycine max
Glyma.20G005600 0.5kb downstream 0.5kb downstream 5184 true Chr20: 532311-537494 Glycine max
Glyma.20G005600 0.5kb downstream 0.5kb downstream 500 false Chr20: 536995-537494 Glycine max
Glyma.20G005600 1.0kb upstream 1.0kb upstream 5684 true Chr20: 531311-536994 Glycine max
Glyma.20G005600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 531311-532310 Glycine max
Glyma.20G005600 1.0kb downstream 1.0kb downstream 5684 true Chr20: 532311-537994 Glycine max
Glyma.20G005600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 536995-537994 Glycine max
Glyma.20G005600 2.0kb upstream 2.0kb upstream 6684 true Chr20: 530311-536994 Glycine max
Glyma.20G005600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 530311-532310 Glycine max
Glyma.20G005600 2.0kb downstream 2.0kb downstream 6684 true Chr20: 532311-538994 Glycine max
Glyma.20G005600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 536995-538994 Glycine max
Glyma.20G005600 5.0kb upstream 5.0kb upstream 9684 true Chr20: 527311-536994 Glycine max
Glyma.20G005600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 527311-532310 Glycine max
Glyma.20G005600 5.0kb downstream 5.0kb downstream 9684 true Chr20: 532311-541994 Glycine max
Glyma.20G005600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 536995-541994 Glycine max
Glyma.20G005600 10.0kb upstream 10.0kb upstream 14684 true Chr20: 522311-536994 Glycine max
Glyma.20G005600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 522311-532310 Glycine max
Glyma.20G005600 10.0kb downstream 10.0kb downstream 14684 true Chr20: 532311-546994 Glycine max
Glyma.20G005600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 536995-546994 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296591 5265 Fabidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.65679 0.0 5.76575    
cufflinks 0.28551 0.0 1.09678   Low
cufflinks 0.397802 0.0 1.50351   Low
cufflinks 0.820802 0.0 2.99718    
cufflinks 0.958018 0.0 3.47708    
cufflinks 2.42659 0.0 8.09791    
cufflinks 1.01115 0.0 3.65671    
cufflinks 5.11179 0.0 15.3267   High
cufflinks 1.55694 0.0 5.44252    
cufflinks 0.107        
cufflinks 0.046     Low Low
cufflinks 0.152        
cufflinks 0.171        
cufflinks 0.074        
cufflinks 0.016     Low Low
cufflinks 0.389        
cufflinks 0.93       High
cufflinks 0.357        
cufflinks 0.079     Low  
cufflinks 0.539       High
cufflinks 0.115        
cufflinks 0.427        
cufflinks 0.468        
cufflinks 0.069        
cufflinks 0.484        
cufflinks 0.187        

0 Strain