Gene : Glyma.20G052400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12526:SF232 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT A Genomic Order:  524
Name:  ? Glyma.20G052400 Secondary Identifier:  ? PAC:30520411
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G052400 0.5kb upstream 0.5kb upstream 2201 true Chr20: 11829978-11832178 Glycine max
Glyma.20G052400 0.5kb upstream 0.5kb upstream 500 false Chr20: 11829978-11830477 Glycine max
Glyma.20G052400 0.5kb downstream 0.5kb downstream 2201 true Chr20: 11830478-11832678 Glycine max
Glyma.20G052400 0.5kb downstream 0.5kb downstream 500 false Chr20: 11832179-11832678 Glycine max
Glyma.20G052400 1.0kb upstream 1.0kb upstream 2701 true Chr20: 11829478-11832178 Glycine max
Glyma.20G052400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 11829478-11830477 Glycine max
Glyma.20G052400 1.0kb downstream 1.0kb downstream 2701 true Chr20: 11830478-11833178 Glycine max
Glyma.20G052400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 11832179-11833178 Glycine max
Glyma.20G052400 2.0kb upstream 2.0kb upstream 3701 true Chr20: 11828478-11832178 Glycine max
Glyma.20G052400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 11828478-11830477 Glycine max
Glyma.20G052400 2.0kb downstream 2.0kb downstream 3701 true Chr20: 11830478-11834178 Glycine max
Glyma.20G052400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 11832179-11834178 Glycine max
Glyma.20G052400 5.0kb upstream 5.0kb upstream 6701 true Chr20: 11825478-11832178 Glycine max
Glyma.20G052400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 11825478-11830477 Glycine max
Glyma.20G052400 5.0kb downstream 5.0kb downstream 6701 true Chr20: 11830478-11837178 Glycine max
Glyma.20G052400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 11832179-11837178 Glycine max
Glyma.20G052400 10.0kb upstream 10.0kb upstream 11701 true Chr20: 11820478-11832178 Glycine max
Glyma.20G052400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 11820478-11830477 Glycine max
Glyma.20G052400 10.0kb downstream 10.0kb downstream 11701 true Chr20: 11830478-11842178 Glycine max
Glyma.20G052400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 11832179-11842178 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238269 5265 Fabidae Singleton cluster - no MSA
124038996 5270 Rosid View MSA
123611086 5271 Pentapetalae View MSA
122645665 5272 Eudicot View MSA
122046475 5273 Angiosperm View MSA
123429006 5275 Viridiplantae View MSA
121346219 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.782491 0.0 3.03119    
cufflinks 1.64549 0.0 6.17025   High
cufflinks 1.25374 0.0 4.75649    
cufflinks 1.20918 0.0 4.59391    
cufflinks 1.20984 0.0 4.59236    
cufflinks 0.39822 0.0 1.58205   Low
cufflinks 1.24408 0.0 4.72143    
cufflinks 0.95362 0.0 3.65962    
cufflinks 1.09984 0.0 4.19537    
cufflinks 0.971        
cufflinks 0.33       Low
cufflinks 1.769       High
cufflinks 1.081        
cufflinks 0.829        
cufflinks 0.638        
cufflinks 1.072        
cufflinks 0.554        
cufflinks 2.595       High
cufflinks 2.093       High
cufflinks 1.034        
cufflinks 0.352       Low
cufflinks 1.208        
cufflinks 1.771       High
cufflinks 0.286       Low
cufflinks 1.213        
cufflinks 0.394       Low

0 Strain