Gene : Glyma.20G047500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR26374:SF191 - C2H2-TYPE ZINC FINGER FAMILY PROTEIN Genomic Order:  475
Name:  ? Glyma.20G047500 Secondary Identifier:  ? PAC:30521557
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G047500 0.5kb upstream 0.5kb upstream 2246 true Chr20: 8929016-8931261 Glycine max
Glyma.20G047500 0.5kb upstream 0.5kb upstream 500 false Chr20: 8929016-8929515 Glycine max
Glyma.20G047500 0.5kb downstream 0.5kb downstream 2246 true Chr20: 8929516-8931761 Glycine max
Glyma.20G047500 0.5kb downstream 0.5kb downstream 500 false Chr20: 8931262-8931761 Glycine max
Glyma.20G047500 1.0kb upstream 1.0kb upstream 2746 true Chr20: 8928516-8931261 Glycine max
Glyma.20G047500 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8928516-8929515 Glycine max
Glyma.20G047500 1.0kb downstream 1.0kb downstream 2746 true Chr20: 8929516-8932261 Glycine max
Glyma.20G047500 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8931262-8932261 Glycine max
Glyma.20G047500 2.0kb upstream 2.0kb upstream 3746 true Chr20: 8927516-8931261 Glycine max
Glyma.20G047500 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8927516-8929515 Glycine max
Glyma.20G047500 2.0kb downstream 2.0kb downstream 3746 true Chr20: 8929516-8933261 Glycine max
Glyma.20G047500 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8931262-8933261 Glycine max
Glyma.20G047500 5.0kb upstream 5.0kb upstream 6746 true Chr20: 8924516-8931261 Glycine max
Glyma.20G047500 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8924516-8929515 Glycine max
Glyma.20G047500 5.0kb downstream 5.0kb downstream 6746 true Chr20: 8929516-8936261 Glycine max
Glyma.20G047500 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8931262-8936261 Glycine max
Glyma.20G047500 10.0kb upstream 10.0kb upstream 11746 true Chr20: 8919516-8931261 Glycine max
Glyma.20G047500 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8919516-8929515 Glycine max
Glyma.20G047500 10.0kb downstream 10.0kb downstream 11746 true Chr20: 8929516-8941261 Glycine max
Glyma.20G047500 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8931262-8941261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314266 5265 Fabidae View MSA
124070419 5270 Rosid View MSA
123743866 5271 Pentapetalae View MSA
122796757 5272 Eudicot View MSA
122051585 5273 Angiosperm View MSA
121348252 5274 Embryophyte View MSA
123380791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0264919 0.0 0.112895 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00812186 0.0 0.0384265 Low Low
cufflinks 0.147214 0.0 0.575702 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0694471 0.0 0.279488 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain