Gene : Glyma.20G033700 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11615:SF81 - CASPARIAN STRIP MEMBRANE PROTEIN 5 Genomic Order:  337
Name:  ? Glyma.20G033700 Secondary Identifier:  ? PAC:30519800
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G033700 0.5kb upstream 0.5kb upstream 2612 true Chr20: 4585480-4588091 Glycine max
Glyma.20G033700 0.5kb upstream 0.5kb upstream 500 false Chr20: 4587592-4588091 Glycine max
Glyma.20G033700 0.5kb downstream 0.5kb downstream 2612 true Chr20: 4584980-4587591 Glycine max
Glyma.20G033700 0.5kb downstream 0.5kb downstream 500 false Chr20: 4584980-4585479 Glycine max
Glyma.20G033700 1.0kb upstream 1.0kb upstream 3112 true Chr20: 4585480-4588591 Glycine max
Glyma.20G033700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 4587592-4588591 Glycine max
Glyma.20G033700 1.0kb downstream 1.0kb downstream 3112 true Chr20: 4584480-4587591 Glycine max
Glyma.20G033700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 4584480-4585479 Glycine max
Glyma.20G033700 2.0kb upstream 2.0kb upstream 4112 true Chr20: 4585480-4589591 Glycine max
Glyma.20G033700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 4587592-4589591 Glycine max
Glyma.20G033700 2.0kb downstream 2.0kb downstream 4112 true Chr20: 4583480-4587591 Glycine max
Glyma.20G033700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 4583480-4585479 Glycine max
Glyma.20G033700 5.0kb upstream 5.0kb upstream 7112 true Chr20: 4585480-4592591 Glycine max
Glyma.20G033700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 4587592-4592591 Glycine max
Glyma.20G033700 5.0kb downstream 5.0kb downstream 7112 true Chr20: 4580480-4587591 Glycine max
Glyma.20G033700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 4580480-4585479 Glycine max
Glyma.20G033700 10.0kb upstream 10.0kb upstream 12112 true Chr20: 4585480-4597591 Glycine max
Glyma.20G033700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 4587592-4597591 Glycine max
Glyma.20G033700 10.0kb downstream 10.0kb downstream 12112 true Chr20: 4575480-4587591 Glycine max
Glyma.20G033700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 4575480-4585479 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313827 5265 Fabidae View MSA
124050355 5270 Rosid View MSA
123746908 5271 Pentapetalae View MSA
122797470 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 9.9241 0.0 43.1605    
cufflinks 3.23588 0.0 19.9221   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.1381 0.0 65.2754    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.701        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.956       High
cufflinks 0.274       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.455        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.669        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.547        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.99        

0 Strain