Gene : Glyma.20G035300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF11 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  353
Name:  ? Glyma.20G035300 Secondary Identifier:  ? PAC:30521284
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G035300 0.5kb upstream 0.5kb upstream 2607 true Chr20: 4897027-4899633 Glycine max
Glyma.20G035300 0.5kb upstream 0.5kb upstream 500 false Chr20: 4899134-4899633 Glycine max
Glyma.20G035300 0.5kb downstream 0.5kb downstream 2607 true Chr20: 4896527-4899133 Glycine max
Glyma.20G035300 0.5kb downstream 0.5kb downstream 500 false Chr20: 4896527-4897026 Glycine max
Glyma.20G035300 1.0kb upstream 1.0kb upstream 3107 true Chr20: 4897027-4900133 Glycine max
Glyma.20G035300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 4899134-4900133 Glycine max
Glyma.20G035300 1.0kb downstream 1.0kb downstream 3107 true Chr20: 4896027-4899133 Glycine max
Glyma.20G035300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 4896027-4897026 Glycine max
Glyma.20G035300 2.0kb upstream 2.0kb upstream 4107 true Chr20: 4897027-4901133 Glycine max
Glyma.20G035300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 4899134-4901133 Glycine max
Glyma.20G035300 2.0kb downstream 2.0kb downstream 4107 true Chr20: 4895027-4899133 Glycine max
Glyma.20G035300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 4895027-4897026 Glycine max
Glyma.20G035300 5.0kb upstream 5.0kb upstream 7107 true Chr20: 4897027-4904133 Glycine max
Glyma.20G035300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 4899134-4904133 Glycine max
Glyma.20G035300 5.0kb downstream 5.0kb downstream 7107 true Chr20: 4892027-4899133 Glycine max
Glyma.20G035300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 4892027-4897026 Glycine max
Glyma.20G035300 10.0kb upstream 10.0kb upstream 12107 true Chr20: 4897027-4909133 Glycine max
Glyma.20G035300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 4899134-4909133 Glycine max
Glyma.20G035300 10.0kb downstream 10.0kb downstream 12107 true Chr20: 4887027-4899133 Glycine max
Glyma.20G035300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 4887027-4897026 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791710 5273 Angiosperm View MSA
122309640 5265 Fabidae View MSA
124067697 5270 Rosid View MSA
123742453 5271 Pentapetalae View MSA
122786457 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.42902 0.0 10.4137    
cufflinks 4.04785 0.0 11.998    
cufflinks 2.09266 0.0 6.77502    
cufflinks 2.5591 0.0 8.06255    
cufflinks 3.12675 0.0 9.64136    
cufflinks 1.12283 0.0 3.92729   Low
cufflinks 2.31586 0.0 7.45577    
cufflinks 7.10171 0.0 19.6761   High
cufflinks 4.16272 0.0 12.3058    
cufflinks 5.28        
cufflinks 1.45        
cufflinks 2.314        
cufflinks 4.602        
cufflinks 2.305        
cufflinks 0.111       Low
cufflinks 4.415        
cufflinks 0.43       Low
cufflinks 3.311        
cufflinks 2.693        
cufflinks 4.542        
cufflinks 1.582        
cufflinks 3.886        
cufflinks 4.044        
cufflinks 0.822        
cufflinks 4.595        
cufflinks 1.476        

0 Strain