Gene : Glyma.20G026700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11468//PTHR11468:SF14 - GLYCOGEN PHOSPHORYLASE Genomic Order:  267
Name:  ? Glyma.20G026700 Secondary Identifier:  ? PAC:30519953
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G026700 0.5kb upstream 0.5kb upstream 10513 true Chr20: 2935653-2946165 Glycine max
Glyma.20G026700 0.5kb upstream 0.5kb upstream 500 false Chr20: 2945666-2946165 Glycine max
Glyma.20G026700 0.5kb downstream 0.5kb downstream 10513 true Chr20: 2935153-2945665 Glycine max
Glyma.20G026700 0.5kb downstream 0.5kb downstream 500 false Chr20: 2935153-2935652 Glycine max
Glyma.20G026700 1.0kb upstream 1.0kb upstream 11013 true Chr20: 2935653-2946665 Glycine max
Glyma.20G026700 1.0kb upstream 1.0kb upstream 1000 false Chr20: 2945666-2946665 Glycine max
Glyma.20G026700 1.0kb downstream 1.0kb downstream 11013 true Chr20: 2934653-2945665 Glycine max
Glyma.20G026700 1.0kb downstream 1.0kb downstream 1000 false Chr20: 2934653-2935652 Glycine max
Glyma.20G026700 2.0kb upstream 2.0kb upstream 12013 true Chr20: 2935653-2947665 Glycine max
Glyma.20G026700 2.0kb upstream 2.0kb upstream 2000 false Chr20: 2945666-2947665 Glycine max
Glyma.20G026700 2.0kb downstream 2.0kb downstream 12013 true Chr20: 2933653-2945665 Glycine max
Glyma.20G026700 2.0kb downstream 2.0kb downstream 2000 false Chr20: 2933653-2935652 Glycine max
Glyma.20G026700 5.0kb upstream 5.0kb upstream 15013 true Chr20: 2935653-2950665 Glycine max
Glyma.20G026700 5.0kb upstream 5.0kb upstream 5000 false Chr20: 2945666-2950665 Glycine max
Glyma.20G026700 5.0kb downstream 5.0kb downstream 15013 true Chr20: 2930653-2945665 Glycine max
Glyma.20G026700 5.0kb downstream 5.0kb downstream 5000 false Chr20: 2930653-2935652 Glycine max
Glyma.20G026700 10.0kb upstream 10.0kb upstream 20013 true Chr20: 2935653-2955665 Glycine max
Glyma.20G026700 10.0kb upstream 10.0kb upstream 10000 false Chr20: 2945666-2955665 Glycine max
Glyma.20G026700 10.0kb downstream 10.0kb downstream 20013 true Chr20: 2925653-2945665 Glycine max
Glyma.20G026700 10.0kb downstream 10.0kb downstream 10000 false Chr20: 2925653-2935652 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308252 5265 Fabidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.472 0.0 40.4312   High
cufflinks 4.75676 0.0 21.8564   High
cufflinks 2.42851 0.0 11.4318    
cufflinks 0.784906 0.0 3.86217    
cufflinks 0.626106 0.0 3.36479    
cufflinks 0.241062 0.0 1.14714 Low Low
cufflinks 0.162479 0.0 0.807023 Low Low
cufflinks 1.54833 0.0 8.2429    
cufflinks 0.635723 0.0 2.56696    
cufflinks 0.265        
cufflinks 0.014     Low  
cufflinks 0.287        
cufflinks 0.033     Low  
cufflinks 0.006     Low Low
cufflinks 0.007     Low Low
cufflinks 0.285        
cufflinks 0.017     Low  
cufflinks 0.399        
cufflinks 0.303        
cufflinks 0.579       High
cufflinks 0.013     Low  
cufflinks 0.609       High
cufflinks 1.574       High
cufflinks 0.01     Low Low
cufflinks 0.315        
cufflinks 0.023     Low  

0 Strain